Sorex fumeus (smoky shrew): 130020987 Help Entry 130020987         CDS       T10594                                  Name (RefSeq) tubulin alpha-1D chain   KO K07374   tubulin alpha Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum04145   Phagosome sfum04210   Apoptosis sfum04517   IgSF CAM signaling sfum04530   Tight junction sfum04540   Gap junction sfum04814   Motor proteins sfum05010   Alzheimer disease sfum05012   Parkinson disease sfum05014   Amyotrophic lateral sclerosis sfum05016   Huntington disease sfum05020   Prion disease sfum05022   Pathways of neurodegeneration - multiple diseases sfum05132   Salmonella infection Brite KEGG Orthology (KO) [BR:sfum00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     130020987  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     130020987   09143 Cell growth and death    04210 Apoptosis     130020987   09144 Cellular community - eukaryotes    04530 Tight junction     130020987    04540 Gap junction     130020987   09142 Cell motility    04814 Motor proteins     130020987  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     130020987   09164 Neurodegenerative disease    05010 Alzheimer disease     130020987    05012 Parkinson disease     130020987    05014 Amyotrophic lateral sclerosis     130020987    05016 Huntington disease     130020987    05020 Prion disease     130020987    05022 Pathways of neurodegeneration - multiple diseases     130020987  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sfum03019]     130020987    03036 Chromosome and associated proteins [BR:sfum03036]     130020987   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:sfum04812]     130020987    04147 Exosome [BR:sfum04147]     130020987 Messenger RNA biogenesis [BR:sfum03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      130020987 Chromosome and associated proteins [BR:sfum03036]  Eukaryotic type   Centrosome formation proteins    Microtubules and associated factors     Other tubulins      130020987 Cytoskeleton proteins [BR:sfum04812]  Eukaryotic cytoskeleton proteins   Microtubules    Tubulins     130020987 Exosome [BR:sfum04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    130020987   Exosomal proteins of other body fluids (saliva and urine)    130020987   Exosomal proteins of colorectal cancer cells    130020987 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Tubulin Tubulin_C Tubulin_3 DUF7281 Motif Other DBs NCBI-GeneID:  130020987 NCBI-ProteinID:  XP_055967679 LinkDB All DBs Position Unknown AA seq 452 aa AA seqDB search MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLD RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE AREDMAALEKDYEEVGMDSVEGEGDEEEGDEY NT seq 1359 nt NT seq  +upstreamnt  +downstreamnt atgcgtgaatgcatctctgtgcacgtggggcaggctggcgtgcagatcggcaatgcctgc tgggagctctactgcctggagcacgggatccagcccgatgggcagatgcccagcgacaag accatcgggggaggggacgactcctttaacaccttcttcagcgagactggggcggggaag catgtgccccgcgctgtgtttgtggatctggaacccactgtgatcgatgaggttcgcacg ggcacgtaccgccagctcttccatccagagcagctgatcacgggcaaggaagatgccgct aacaactatgcccgagggcactacaccatcggcaaggagctcattgacctggtgctggac cggattcggaagctggctgaccagtgcacaggcctccagggcttcctgatcttccacagc ttcggagggggcaccggctctggctttacctcgctgctcatggagcgactctctgtggac tacggcaagaagtccaagctggagttctccatctacccagcccctcaggtgtccacggcc gtggtggagccctacaactccatcctgaccacgcacaccaccctggagcactcggactgt gccttcatggtggacaacgaggccatctacgacatctgccggcgcaacctggacatcgag cggcccacctacaccaacctcaaccgtctcatcggccagatcgtgtcctccatcacggcc tcgctgcgcttcgacggggccctcaacgtggacctgaccgagttccagaccaacctggtg ccctaccctcgcatccacttccccctggccacctacgcgccggtcatctcggccgagaag gcctaccatgagcagctgtcggtggccgagatcaccaacgcctgcttcgagccggccaac cagatggtgaagtgcgacccccgccatggcaagtacatggcctgctgcctgctgtaccgg ggcgacgtggtacccaaggatgtcaatgccgccatcgccaccatcaagaccaagcgcacc atccagttcgtggactggtgccccacgggcttcaaagtgggcatcaactaccagcccccg acggtggtgcccgggggagacctggccaaggtgcagcgggccgtgtgcatgctgagcaac accaccgccatcgccgaggcctgggcccgcctggaccacaagttcgacctgatgtatgcc aagcgggcgttcgtgcactggtacgtgggcgagggcatggaggagggcgagttctccgag gcccgggaggatatggccgccctggagaaggattacgaggaggtgggcatggatagtgtt gagggggagggggatgaggaggagggggatgaatactag

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