Sorex fumeus (smoky shrew): 130021386
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Entry
130021386 CDS
T10594
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Enzymes [BR:
sfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130021386 (DDX4)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130021386 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130021386
NCBI-ProteinID:
XP_055968117
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Position
Unknown
AA seq
706 aa
AA seq
DB search
MGDEDWEAEIIKPHVSSYVPVFDKDRYSSGANGDTFNRTPGSSSEMDDGPTRRDHFMRSG
FGSGRSLGNRDAGESNKRENTSAMGGFGVGKGFGNRGFSNNKFEEGDSSGFGRGYQDGND
CEASASPRRGGRGSFRGGRGGFGLGSSNSEFEQDEGVQRTGGLFGPRRPAFSDTGNGDTY
PSRGGSGSSRGGYKGLNEEIITGSGKNSWKSEAEGGESGDTQGPKVTYIPPPPPEDEDSI
FAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNKNIAKAGYTKLTPVQKYS
IPIILAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELI
NQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIIQGCNILCATPGRLMDIIGKEKIGLK
QVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSREQRQTLMFSATFPEEIQRLAGEFLKT
NYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRNIGEERTMVFVETKKKADFIAT
FLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLP
STIDEYVHRIGRTGRCGNTGRAISFFDPESDSHLAQPLVKVLSDAQQDVPAWLEEIAFST
YAPGFGGSTRGNIFASVDTRKSKSTLNTGGFSSSQTPNPVDDESWD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaagattgggaagcagaaataatcaagcctcatgtgtcgtcgtacgtccct
gtcttcgacaaggatagatactcttctggagcaaatggagacacctttaacaggactcca
ggttcatcatcagaaatggatgatggacctactagaagagaccatttcatgagaagtgga
tttggctctgggagaagtttgggaaacagagatgctggcgagtctaataaaagagagaat
acatctgcaatgggtggttttggagttggaaagggttttggaaacagaggtttttcaaat
aacaagttcgaagaaggtgatagctctggtttcgggagaggctatcaagatggaaatgat
tgtgaagcttcagcatcacctagacgaggtggaagaggtagtttcagaggtggccgtgga
ggatttggtcttggaagttcaaatagtgaatttgaacaggatgagggagtacagcgcact
ggtggcctttttggtcctcgaagaccagcatttagtgatacaggtaatggtgacacctat
ccaagcagaggtgggagtggaagtagccgaggtggttacaaaggtttaaatgaagaaata
ataacaggctctggaaagaattcttggaaatcagaagcagaaggaggagaaagtggtgat
actcaaggaccaaaagtgacctacataccacctcctccacctgaggatgaggactccatc
tttgcacattatcagacaggaataaactttgataaatatgatacaattcttgtagaggtg
tctggacatgatgcaccaccagcaattctgacatttgaagaagctaatctttgtcagaca
ctgaataaaaacattgctaaagctggttatactaagcttactcctgtgcagaagtacagt
attcctattatattagctggacgagatttaatggcttgtgctcaaacaggatctggcaag
actgctgcttttctcttgcctattttggctcatatgatgcgtgatggaataactgccagt
cgttttaaagaactgcaggaaccagaatgtattattgtagcaccaactcgagaattgatc
aatcagatttatttggaggctcgaaaattttcttttgggacttgtgtaagagctgttgtc
atatatgggggaacccagttggggcattcaattcgacaaataatacaaggctgtaatata
ttatgtgctactcctggtagattgatggatatcataggtaaagaaaagattggtctcaag
caagtcaaatacctagttttggatgaagctgatcgtatgttggatatgggttttggacca
gaaatgaagaagttgatttcttgcccaggaatgccttcaagggaacagcgtcaaacccta
atgtttagtgcaacttttccagaagaaattcaaaggttggctggtgagtttttaaagaca
aattatttgtttgttgctgttggacaagtgggtggagcatgtcgagatgtccagcagacc
attctccaagttggccagtactcaaaaagagagaaacttgtcgaaattctacgaaacata
ggtgaagaaaggactatggtttttgttgaaactaagaaaaaagcggattttattgctact
tttctttgtcaagaaaaaatatcaactacaagtattcatggtgaccgggaacagagagag
agagaacaagctcttggggattttcgctgtggaaagtgcccagttcttgttgctacttca
gtagctgccagggggctagatattgaaaatgttcagcatgttatcaattttgatcttcct
tctaccattgatgagtatgttcatcgaattgggcgtactggtcggtgtggaaatactggc
agagcgatttcttttttcgatcctgaatcagatagccatttagcacagccgctagtgaaa
gtactgtcggatgctcaacaggatgttcctgcatggttggaagaaattgcctttagtaca
tatgctcctggcttcggtggtagtacaagaggaaacatttttgcatcagttgatactcga
aagagtaagagcactttgaacacaggaggattttcttcatcacagactcccaatcctgta
gatgatgagtcatgggattaa
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