Sorex fumeus (smoky shrew): 130023342
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Entry
130023342 CDS
T10594
Symbol
ACAN
Name
(RefSeq) aggrecan core protein isoform X1
KO
K06792
aggrecan 1
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sfum00535
]
130023342 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
sfum00536
]
130023342 (ACAN)
04091 Lectins [BR:
sfum04091
]
130023342 (ACAN)
Proteoglycans [BR:
sfum00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
130023342 (ACAN)
Glycosaminoglycan binding proteins [BR:
sfum00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
130023342 (ACAN)
Lectins [BR:
sfum04091
]
C-Type lectins
Lecticans
130023342 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
EGF
Sushi
EGF_TEN
EGF_2
hEGF
I-set
Ig_3
Motif
Other DBs
NCBI-GeneID:
130023342
NCBI-ProteinID:
XP_055969814
LinkDB
All DBs
Position
Unknown
AA seq
2127 aa
AA seq
DB search
MSALLLLLAALRAVTATDSMHMSAPDNSLSVSIPEPSPLRAPLGSTITIPCYFIDPVLPV
TTAPATAPLSPRIKWSRVSKEREVVLLVATEGQVRVHSAYQDRASLPNYPAIPSDATLEM
RSLRANDSGVYRCEVVHGVDDSQATVELAVKGIVFHYRAISTRYTLDFDRAQRACLQNSA
IIASPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDKDEFPGVRTYGLRDTNE
TYDVYCFAEDMEGDVFYATSPDKFTFQEAAAECRRLGARLATTGQLYLAWQAGMDMCSAG
WLADRSVRYPISKARPNCGGNTLGVRTVYLHANQTGYPDPSSRFDAICYTGEDFVDIPED
FFGAGGEDITIQTVTWPDLELPLPPRNITEGEARGNVILTARPIFEVPPTAPEPQEPFSF
EPDLEATGFPGAENETGGAPGPWDFAEVPTAGPGSVTSFTSDDLVVQVTAAPGAAEVPGQ
PQLARGVVFHYRPGSTRYALTFEEAQQACLRTGAVMASPEQLQAAYEAGYEQCDAGWLRD
QTVRYPIVSPRTPCVGDKDSSPGVRTYGVRPPSETYDVYCYVDRLEGEVFFITRLEQFTF
QEALAACASHNATLASTGQLYAAWSRGLDKCYAGWLADGSLRYPIVTPRPACGGDKPGVR
TVSLYQNQTGLPDPLSRHHAFCFRGTSAVPSPGEDGDTPTLSSVEEDLMVTQVAPGVAAG
PLEEEMTITPGFTEPENQTEWVPEHTPASQYPLPGPPPTWPPTDTATEEGTEGPFVLPGA
SEEMSTLPPLQPRGTQLPGAEETSGDLSGSGDVSGHLHASGQPSEGLDSTARPDLGSGLP
EESGSASGDGDRIVGANVPEVGKLPPGGKELEGPASGGEELSGLASGEIPEVSVSGEREF
GGVPSGEGPEVSASGEREFGGVLSGEGPEVSASGEGQFGGVPSGEGPEVSASGEGQFGGV
PSGEVPEVSTSGGQELSGISSGEVPEVSASGEGEFTGILSGQAPEVSASGGQEFSGVPSG
EVPEVSASGGQELSGISSGEVPEASASGEGEFTGILSGQVPEVSASGGQEFSGVPSGEVP
EFSASGGKELSGISSGEVPEVSASGEGEFTGILSGQTPEISASGGQEFSGVPSGEVPEFS
ASGGKELSGISSGDVPEASASGEGEFTGTPSGEDLEASASGRGVFTGVLSGVPEASASGD
DDLGALPSGRESLETSASGLEGLSGSAPGKGDFGGSASGAWDLGGLPSGVLGSGLTPEVS
GLPSGLGEYSGVDLGSGPSSGLPDFSGLPSGLPTVSLVDTTLVEVLTTTTAGELEGRGAM
GVSGAGEVSGLPWGSELDISGAASGFSSGAEPSGQAPGAPDISGRVSGFPGETSGMPDLS
GLSSGQPDISGEASGILVGSGQPFGVTGVSEGESGVRDVSGQPSGWPELHGTPSGATSGS
GDVTFVDTHLVEAVPTPFKGQEGLGSVELSGLPSGETELTSASGTVEGSGRVLGAAESWE
LSPRPTDLRGLPSSEAEVSGDASGAEAGSGGTSGLPTVSLVDRTLVESGTPAPTAQEAEG
PSGVWELSGVPSGLGDLSGLPSGPAEPSGTPASSPPFSEDFPSATADISGDGSAATGTSE
EPSGLPEVLEGVTSPTILQELGQRPPETQFPRVPESSGDVSGSGDMSGSIPGSKTETSEV
PEFSKETSAYPSPEMGVSATPEASGGASGSPDLSQVPSSFPGTAWEDSTAPELSGEPAEP
TDATYVSTRDASGWTLAPPPASGDRMEGSSSGLDIIIATRVPESEWTQESQPPAEALVET
EASSPLHSGEDDQTATAASPSTDDVSSLPEDADEAGDSSAVRPRSCAEARCGAGTCQETE
DGVVCLCPAGHAGEHCDIDIDECFSSPCRNGGTCVDGAAAVTCLCLPSYRGDLCETDQEL
CQEGWTKFQGHCYRHFPERASWADAEGRCREEEAHLSSILTPEEQEFVNSNAQDYQWIGL
NDRTIEGDFRWSDGHSLLYENWRPNQPDNFFATGEDCVVMIWHEKGEWNDVPCNYHLPFT
CKKGTVACGQPPAVQHARPLGRPKARYEINAVERYQCARGFVQRHVPTVRCLPSGQWEEP
RVTCTDAATYQRRRRQRSPRRHRPAGH
NT seq
6384 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctttactcctgctcttggcagctctgagggccgtcaccgccaccgactccatg
cacatgtcagcccctgacaactccctgagcgtcagcatccctgagccgtccccgctgcgg
gcgcccctgggcagcaccatcaccatcccctgctacttcatcgaccccgtgctccccgtg
accacggcccccgccaccgccccgctcagcccccggatcaagtggagccgcgtgtccaag
gagagggaggtggtgctgctggtggccacggaggggcaggtgcgggtccacagcgcctac
caggaccgcgcgtccctccccaactacccggccatccccagcgacgccacgttggagatg
cgcagcctgcgtgccaatgactccggcgtctaccgctgcgaggtggtccatggcgtggac
gacagccaggccacggtggagctggcggtgaaaggcatcgtgttccattacagagccatc
tccacacgctacacactggatttcgaccgcgcgcagcgggcctgcctgcagaacagtgcc
atcatcgccagccccgagcagctgcaggccgcctacgaggacggcttccaccagtgtgac
gccggctggctggccgaccagaccgtccggtaccccatccacacgccccgggagggctgc
tacggggacaaggatgagttcccaggcgtgaggacctacggcctgcgggacaccaatgag
acctacgatgtctactgctttgctgaggacatggagggcgacgtcttctatgccacctcc
cccgacaagttcaccttccaggaggcagcggctgagtgccggcggcttggcgcgcggctg
gctaccacgggccagctctacctggcctggcaggccgggatggacatgtgcagtgcgggc
tggctggccgaccgaagcgtgcgctatcccatctccaaggcccggcccaactgcggcggg
aacacgctgggcgtgaggaccgtgtacctgcacgccaaccagacggggtaccccgacccc
tcgtcccgcttcgatgccatctgctacacaggtgaagactttgtggacatcccagaagac
ttcttcggggccggtggcgaggacatcaccatccagacggtcacgtggcccgacctggag
ctgcccctgcctccccggaacatcaccgagggggaggcccggggcaacgtgatcctcaca
gcaaggcccatcttcgaggtgcccccgacagcacctgagccccaggagcccttcagcttc
gagcccgacctggaggccactggcttccccggggccgagaacgagactgggggggcccct
gggccctgggactttgcggaggtgccaacggctggtccaggctcagtcacctccttcacc
agcgacgacttggtggtgcaggtgaccgcggccccgggagctgccgaagtccctggacag
ccgcaactggccaggggggtcgtgttccactaccgcccgggctccacccgctacgcgctg
accttcgaggaggcccagcaagcgtgtctgcgcaccggggcagtcatggcctccccagaa
cagctgcaggccgcctacgaggcaggctacgagcagtgtgatgccggctggctgcgggac
cagacagtcaggtaccccatcgtgagccctcggaccccctgtgtgggggacaaggacagc
agccccggggtccggacatacggtgtgcgccccccgtccgagacctacgacgtttactgc
tatgtggaccggctggagggggaggttttcttcatcacccgcctggagcagttcaccttc
caggaagccctggccgcctgtgccagccacaatgccaccctggcgtccacgggccagctc
tatgccgcctggagccgcggcctggacaagtgctatgcgggctggctggctgacggcagc
ctccggtaccccattgtgaccccacggcccgcctgcggtggggacaagccgggcgtgagg
acggtctcgctctaccagaaccagacaggcctcccggaccccctgtctcgacaccacgcc
ttctgcttccgaggtacatctgcagtgccatctcccggagaagatggggacacccccaca
ctgtcctcagtcgaagaggacctgatggtgacccaagtggcccccggagtggctgccggt
cccctggaggaagagatgaccatcacccctggcttcacagagcctgagaaccagacggag
tgggtgcccgagcacacccccgccagccagtacccactgccagggccccctcccacatgg
cctcccacggacacagccacagaggaaggcacagaagggcccttcgtgttgcccggggcc
tcggaggagatgtccacactccccccactgcagccccgcgggacccagctgccaggtgct
gaggagacatccggggacctctcgggcagtggagatgtttctggccacctgcacgccagc
gggcagccctcagaaggcctggactccactgcccgccctgacctgggctcaggcctgccc
gaagagagtggatcagcctctggggatggagacagaattgtgggcgccaacgtccctgaa
gttggaaagcttccaccaggaggcaaggaacttgagggtccggcctctgggggtgaggag
ctcagtggacttgcttctggagaaattccagaagtttctgtctctggagaaagagagttt
ggtggtgttccttctggagaaggtccagaagtttctgcctctggagaaagagagtttggt
ggtgttctttctggagaaggtccagaagtttctgcctctggagaaggacagtttggtggt
gttccttctggagaaggtccagaagtttctgcctctggagaaggacagtttggtggtgtt
ccttctggagaagttccagaagtttctacctctgggggacaggagctcagtggaattagt
tctggagaagttccagaagtttctgcctctggagaaggggagttcactggaattctttct
ggacaagctccagaagtttctgcctctggaggacaggagttcagtggtgttccttctgga
gaagttccagaagtttctgcctctgggggacaggagctcagtggaattagttctggagaa
gttccagaagcttctgcctctggagaaggggagttcactggaattctttctggacaagtt
ccagaagtttctgcctctggaggacaggagttcagtggtgttccttctggagaagttcca
gaattttctgcctctgggggaaaggagctcagtggaattagttctggagaagttcctgaa
gtttctgcctctggagaaggggagttcactggaattctttctggacaaactccagaaatt
tctgcctctggaggacaggagttcagtggtgttccttctggagaagttccagaattttct
gcctctgggggaaaggagctcagtggaattagttctggagatgttccagaagcttctgcc
tctggagaaggagagttcactggaactccttctggagaagatctagaagcttctgcctct
ggcagaggggtgttcactggagtgctttctggagttccagaagcttctgcctctggagat
gatgaccttggggcccttccttctggaagggaaagtctagaaacttctgcttctgggctt
gagggcctcagcggctcagcccctgggaagggggactttggaggctctgcttctggagcc
tgggacctcggtgggttgccctctggagtcctgggcagtgggctcacaccagaagtcagt
ggccttccctcaggacttggtgagtattctggggtggaccttgggagtggcccttcctct
ggcctgcctgacttcagtggactgccctcgggcctccccacagtctccctggtggacacc
actctggtggaggttctcacgaccaccaccgcgggggaactggaggggcggggggccatg
ggtgtcagcggtgctggtgaagtctctggactgccctggggcagcgagctggacatcagt
ggggcggccagtggattttcttcaggggccgaacccagcggccaggcccctggagctcct
gacatcagcgggcgggtatcagggttccccggggaaacatccgggatgcctgatctcagc
ggactctcctcgggacaaccagacatcagcggagaagcttctggcattctggtgggcagt
ggtcaaccattcggtgtgaccggggtgagtgaaggagaatcaggggtccgcgatgtcagc
gggcagccctcagggtggccagagctccatgggaccccctctggggcgacaagtggcagt
ggggacgtcacctttgtggacacccatttggtggaagcggtcccaaccccgtttaaggga
caggaaggcttggggtccgtggagctcagcggcctcccttctggggagaccgagctcaca
agcgcctctggcacggtggagggcagcggccgggtgctcggagctgcagagtcctgggag
ctgagcccgcggcccacagacctccgagggctgccgagcagtgaggcggaggtgagcgga
gacgcttcgggagcagaggctgggagcgggggtacctctggcctccccacggtctcactg
gtggacaggactttggtggagtctggaaccccagctcccactgcccaggaagcagaagga
ccttcaggcgtctgggaactcagtggggtcccttcgggtctcggggacctaagcggactc
ccgtctggtccagcggagcccagcggaactcccgcaagctccccacctttcagcgaagat
tttcccagcgccaccgctgacatcagcggggacggctctgcagccacgggcaccagcgag
gaaccctcagggctcccggaagtcctggagggagtcacgagccccacaattctgcaggaa
ctgggccaacggcccccagaaactcaattcccccgggtgccagagtccagtggagacgta
tcaggatctggggacatgagcgggagcattccaggatccaagacggaaacctcggaggtg
ccagaattcagcaaagaaacatctgcttacccttcacctgaaatgggggtgtcggccacc
cccgaggccagcggaggagcctcagggtcccctgacctgagtcaagtgccctcatccttc
ccggggacagcgtgggaggactccaccgccccggagctgagtggagaaccggcagagccc
actgacgccacgtatgtaagcacccgtgatgcttcgggctggactctggccccacccccg
gcttctggagacaggatggagggcagcagctccggcctggacatcatcatcgccacacga
gtccctgagtctgagtggacccaggagagtcagccgcctgccgaggctctggtggaaacc
gaggcatccagcccactgcactcgggagaagacgaccaaacagccactgctgccagcccc
tccacagacgacgtgtccagcctcccggaagacgctgatgaggcgggagactcctctgca
gttcgccccaggtcctgtgccgaggcccgctgtggcgctgggacctgccaggagacagag
gatggtgtggtgtgcctgtgccccgctggtcacgccggtgagcactgcgacatagacatt
gacgagtgcttctcaagcccttgtcggaacggaggcacctgcgtggacggggctgccgct
gttacatgcttgtgccttcccagctaccgaggcgacctgtgcgagaccgaccaggagctg
tgccaagagggctggaccaagttccagggccactgctaccgccacttccccgagcgcgcc
agctgggcggacgctgagggccgctgccgggaggaggaggcgcatctcagcagcatcctg
acccccgaggagcaggagttcgtcaacagcaatgcccaggactaccagtggatcggcctg
aatgaccgcaccatcgaaggggacttccgctggtcagacgggcactccttgctatatgag
aactggaggcccaaccagcccgacaacttctttgctaccggcgaggactgcgtggtgatg
atctggcacgagaagggggagtggaatgacgtgccctgcaactaccacctgccgttcacc
tgcaaaaagggcacagtggcctgcggacagccccccgcggtgcagcacgcgcggcccctg
ggccggcccaaggcgcgctacgagatcaacgcggtggagcgttaccagtgcgcgcggggc
ttcgtccagcgccacgtgcccaccgtccgctgcctgcccagcggccagtgggaggagccc
cgggtcacctgcacggacgccgccacctaccagcgcagacgccggcagcggagcccgcgg
cggcaccgacccgcaggacactga
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