Sorex fumeus (smoky shrew): 130028076
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Entry
130028076 CDS
T10594
Symbol
RAPGEF2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04010
MAPK signaling pathway
sfum04015
Rap1 signaling pathway
sfum04517
IgSF CAM signaling
sfum04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130028076 (RAPGEF2)
04015 Rap1 signaling pathway
130028076 (RAPGEF2)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130028076 (RAPGEF2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130028076 (RAPGEF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RA
RasGEF_N
PDZ
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
130028076
NCBI-ProteinID:
XP_055974778
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MASYVDNSFRQAVMKNPAERTPQDLEIVYSYLHGMEALSNLREHQLRLMCETVRYERHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSFRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPVGKPPLPRGYHTECTKS
QLPADFTKLHLTDSLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATESEAGDMDLSGLP
ETAVDSEDDDDEEDIERASDPLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPDGKAEILCMGNSF
GVSPTMDKEYMKGVMRTKVDDCQFVCIAQQDYCRILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTSERLTMHLVEEHSVVDPTFIEDFLLTYRTFLSSPMEVGKKLLEW
FNDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTRFLEEFENNLEREKMGGHLRLLNIACAA
KAKRRLMTLTKPSREAPLPFILLGGSEKGFGIFVDSVDSGSKATEAGLKRGDQILEVNGQ
NFENIQLSKAMEILRNNTHLSITVKTNLFVFKELLTRLSEEKRNGAPHLPKIGDIKKASR
YSIPDLAVDVEQVIGLEKVNKKSKANTVGGRNKLKKILDKTRISILPQKPYNDIGIGQSQ
DDSIVGLRQTKHIPTALPVSGTLSSSNPDLLQSHHRILDFSTTPDLPDQVLRVFKADQQS
RYIMISKDTTAKEVVVQAIREFAVTATPDQYSLCEVSVTPEGVIKQRRLPDQLSKLADRI
QLSGRYYLKNNMETETLCSDEDAQELLRESQISLLQLSTVEVATQLSMRNFELFRNIEPT
EYIDDLFKLKSKTSCANLKKFEEVINQETFWVASEILRETNQLKRMKIIKHFIKIALHCR
ECKNFNSMFAIISGLNLAPVARLRTTWEKLPNKYEKLFQDLQDLFDPSRNMAKYRNVLNS
QNLQPPIIPLFPVIKKDLTFLHEGNDSKVEGLVNFEKLRMIAKEIRHVGRMASVNMDPAL
MFRTRKKKWRSLGSLSQGSTNATVLDVAQTGGHKKRVRRSSFLNAKKLYEDAQMARKVKQ
YLSNLELEMDEESLQTLSLQCEPATNTLPKNPGDKKPVKSETSPVAPRAGLQQKAQPPQP
AQKLNQALTVPAVSLYPSRKKVPVKDLPPFGINSPQALKKILSLSEEGSLERHKKQAEDT
ISNASSPPTSPQSSPRKGYTLAPSGTVDNFSDSGHSEISSRSSIVSNSSFDSVPVPLHDE
RRQRHSVSIVETNLGVGRMERRTMIEPDQYSLGSYAAMSESRGLYATATVISSPSTEELV
QDQGDRASLDAADSGRGSWTSCSSGSHDNIQTIQHQRSWETLPFGHTHFDYSGDPAGLWA
SSSHMDQMMFSDHSTKYTRQSQSRESLEQAQSRASWASSTGYWGEDSEGDTGTIKRRGGK
DVSIEAESSNIASVTTEETKPVPMPAHIAVTPTTAKGLMARKEGRYREPPPTPPGYIGIP
ITDFPEGHAHPARKPPDYNVALQRSRMVARPSDPAGPSPVQQPPGQTASGRPVNKPQWHK
PNECDPRLAPYQSQGFSTEEDEDEQVSAV
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctacgtggataacagcttccgccaggcggtgatgaagaaccccgccgagagg
accccccaggatctggagatagtgtattcctatttacacggtatggaagccttatcaaac
ctgagggagcatcagcttaggttaatgtgtgaaactgtgagatatgaacgacacgaagcc
aatgaagttctatactatcctgatgatattgggacctgctggtatatcctgctctctggc
tccgtgttcatcaaggaatccatgtttcttccgagaagcagttttggcaagcgttctgca
ggaagctttaggcgcggctgtgaatgcattgttttagagccctctgaaatgattgtggtg
gactatatggatgaaaatgaagaatattttcagcgtcaagcttctcatcgacagtctcga
aggagattccggaaaatcaaccagaaaggtgaaagacaaaccatcattgacactgtggac
ccttaccctgttggtaaaccacctctgcctagaggctatcacacggaatgcactaaatct
cagcttcctgcagatttcaccaaactgcaccttactgatagtctccacccacaggtgacg
cacgtttcttccagccactcaggatgtagcatcaccagtgactctgggagcagcagtctt
tcagacatctaccaggccacagaaagtgaggctggtgatatggacttgagtggtctgcca
gaaacagccgtggattctgaggatgacgatgatgaagaagacattgagagggcatcggac
cctctgatgagcagagacattgtgagagattgcctggaaaaggacccaattgacaggacg
gatgatgacatagaacaactgttggagttcatgcaccagttgcctgcttttgccaacatg
acaatgtcggtgagacgggaactctgtgctgtgatggtatttgctgtggtcgagagagcc
ggcaccatagtgttaaatgatggtgaagagctggattcctggtcagtgattctgaatggt
tcggtggaagtgacttatccagatggaaaagcagaaatattatgtatgggaaatagtttt
ggtgtctctcctaccatggacaaagagtacatgaaaggagtaatgagaaccaaggtggat
gattgccagtttgtctgcatagcccagcaagattattgccgtattctcaatcaagtagaa
aagaacatgcaaaaggttgaagaagaaggagaaattgttatggtgaaagaacatcgagaa
cttgatagaactggaacaagaaagggacatattgtcattaagggcacctcagagagatta
acaatgcatttggtggaggagcattcagtggtggatccaaccttcatagaagacttcctt
ttgacctaccgaacttttctttccagcccaatggaagtgggcaaaaagttattggagtgg
tttaatgacccgagcctcagggataaggttacacgggtagtactactgtgggtgaataat
cacttcaatgacttcgaaggagatcctgcaatgactcgatttctagaagaatttgaaaat
aatctggaaagagagaaaatgggtggacatctaagactattgaatattgcgtgtgccgct
aaagcaaaaagaagactgatgacattaacaaaaccatctcgagaagctcctttgcctttt
atcttacttggaggctcagagaagggatttgggatctttgtggacagcgtagattcaggt
agcaaagcaacagaagcaggattgaaacgcggggatcagatactagaagtaaatggtcaa
aactttgaaaatattcagctgtctaaagccatggaaatccttagaaataacacacattta
tctatcactgtgaaaaccaatttatttgtatttaaagaacttctaacaagattgtctgaa
gagaaaagaaatggtgcccctcaccttcctaaaattggagacatcaaaaaggccagtcgc
tactctattccagatctagccgtggatgtcgaacaggtgataggacttgagaaagtaaat
aaaaagagtaaagccaacactgttggaggaaggaacaagttaaaaaagatcctggacaag
actcggatcagtatcttgccccagaaaccatataatgatattgggattggtcagtctcaa
gatgacagcatagtaggcttaaggcagacaaagcacattcccactgcactgcctgtcagt
ggaaccttatcatccagtaatcctgatttattgcagtcccatcatcgcattttggacttt
agtactactcctgatttgccagaccaggtattaagggtttttaaggctgatcaacaaagt
cgatatatcatgataagtaaggacaccacagcaaaagaagtggtcgttcaggccatccgg
gagtttgctgtgactgccacccctgatcaatattcactctgtgaagtttccgtcacacct
gagggagtaatcaagcaaagaagacttccagatcagctctccaaacttgctgatagaata
caactgagtggaaggtactacctgaagaacaacatggagaccgagaccctgtgctctgat
gaagacgcgcaggagctgctgcgggagagtcagatttccctcctgcagctcagcaccgtg
gaagtggccacgcagctctccatgcggaatttcgaactcttccgcaacattgaacccaca
gagtacatcgatgatctatttaaactcaagtcgaaaaccagctgtgccaacctgaagaaa
tttgaggaagtcattaaccaggaaacattttgggtcgcttctgaaattctgagggagaca
aaccagctgaagaggatgaagatcattaagcatttcatcaagatagcactgcactgtcgg
gagtgcaagaattttaactccatgtttgcgatcataagtggcctaaacttggctccagta
gcgagactacgaaccacctgggaaaaacttcccaataaatatgaaaagctatttcaagat
ctccaggacttgtttgatccttccagaaacatggcaaaatatcgcaatgtccttaatagt
caaaacctgcaacctcccatcatcccgctatttcctgtgatcaaaaaagatctcacattc
ctccatgaaggaaatgactccaaagtagagggactggtcaattttgagaaactaaggatg
attgctaaagaaattcgtcatgttggccgcatggcttcagttaacatggaccctgccctc
atgttccggactcggaagaagaagtggaggagtttggggtctctcagccagggtagtaca
aatgcaacagtactagatgttgctcagacaggtggtcataaaaagcgggtacgtcgtagt
tcctttctcaatgccaaaaagctttatgaagatgctcagatggctcgtaaagtgaaacaa
tacctgtccaatttggagctggaaatggatgaggagagtcttcagacattatcactgcag
tgtgaaccagccaccaacacattgcccaagaatcccggtgacaaaaagcctgtcaaatcc
gagacctccccggtggcgccaagggcaggcttgcagcagaaagcccagccgccgcagcca
gcacagaagctcaaccaagccctgacggtgcccgccgtgtccctgtacccttcacggaag
aaagtccctgtcaaggatctcccaccttttggtataaattctccacaagctttaaagaaa
attctttccttgtctgaagaaggcagcctggagcgtcataagaaacaagctgaggatacg
atatcaaatgcatcctcacctccaacttctccccaaagttctccaaggaaaggctacaca
ttggcgcccagtggtactgtggacaacttctccgattccggtcacagtgaaatctcttct
cgctccagcattgtcagcaattcttcctttgactccgtgccagtgccgctccatgacgag
aggcgccagaggcattcagtcagcattgtggaaacaaacctgggcgtagggaggatggag
agaaggaccatgattgagcccgatcaatacagcttggggtcgtatgcagcaatgtccgag
agtcgaggcttatatgctacagctacggtgatttcttctccaagcacagaggaacttgtc
caagaccagggggaccgcgcatcactcgatgctgccgacagtggccgtgggagctggacg
tcgtgctccagtggttcccacgataatatacagaccatccagcaccagagaagctgggaa
acgcttccttttgggcacactcactttgattattcaggggatcctgccggcttatgggcc
tcaagcagccatatggaccaaatgatgttttccgatcacagcacaaagtataccaggcaa
agtcaaagtcgagagagtctggaacaagcccaatcccgggcaagctgggcatcttccacg
ggctactggggggaagactcggaaggtgacaccggcacaataaagcgaaggggtgggaaa
gacgtttccattgaagcagaaagcagtaacatagcttcagtgaccaccgaagaaaccaaa
cccgttcccatgcctgcccacatcgccgtgactccgaccactgcgaagggccttatggca
cgaaaggagggccggtatcgagaacccccgcccacccctccgggctacatcgggatccct
attactgacttccctgaagggcatgctcatccagccaggaagcctccggactacaacgtg
gctcttcagcgatctcggatggtcgcccgacccagtgaccctgccgggccttcccccgtg
cagcagccgcctggtcagacagcaagtggccggccggtgaacaagccccagtggcataaa
cccaacgagtgtgacccgcgcctcgccccctatcagtctcaagggttctctactgaggag
gatgaagatgagcaagtatctgctgtttga
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integrated database retrieval system
