Sorex fumeus (smoky shrew): 130032745
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Entry
130032745 CDS
T10594
Name
(RefSeq) protocadherin beta-3-like isoform X1
KO
K16494
protocadherin beta
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Cell adhesion molecules [BR:
sfum04515
]
Cadherins
Protocadherins
130032745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130032745
NCBI-ProteinID:
XP_055980268
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Position
Unknown
AA seq
796 aa
AA seq
DB search
MEAGGERFLRQRQVLFLFVFLGGSLAGSESRHYSVAEEKERGYLLANLAEDLRMSVGELE
GRGAQVVCKGNRQYLQLNHKTSDLFLLEKLDREELCGLTEPCTLRFQILLQNPLQFITSE
LQVIDINDHSPVFFENEMQLKILENTPPGTVIPLGNAEDLDVGRNSVQNYTISPNEHFHV
LTRSRRDGRKYPELVLDKALDREEQPVLDLTLTALDGGSPQRSGTAQIHILVSDINDNAP
EFTQPLYEVQVLENSPINSVILTVSASDSDTGHFGTISYAFSHAEEEIRNTFRLNPITGD
IQLVKYLNFEAINTYEVDIEAKDGGGLSGKSTVIVQVVDVNDNPPELTLSSITNPIPENS
PETIVAIFSVSDLDSGENGRITCSIENDLPFFLKPSVENFYTLLSEGALDRESQAEYNIT
ITVTDMGTPRLQTQHTITVLVSDVNDNAPAFSQPSYTLLVGENNSPALHIGSVSATDPDA
GSNAQVTYSLLPSQDPQLPLASLVSINADNGQLFALRSLDFEAVRAFEFGVGAWDRGSPA
LSSQVRVRVLVLDRNDNAPFVLYPLQNASAPCSELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSFQLLKATEPGLFSVWAHNGEVRTARPLSERDAPKHRLLVLVRDNGEPPLSASVTLHV
LLVDGFSQPFLPLPDAPSDAPSDDRLTVYLVVALACVSSLFLFSLLAFVTVRLCRQAGPP
AGGPYPLPDAHFPGHLLDVSGAGTLSHSYQYEVCMTGDPRTGEFKFQKPLFPNLLVQDTK
NEIKESPSSTNSFVFS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggaggctggaggagagcgctttcttagacaaaggcaagtcctgtttctctttgttttt
ctgggtgggtctttggctggatcagaatccaggcactactctgtagctgaggaaaaagaa
aggggttatttactggccaatctagcagaggatctccgaatgagtgtaggagaactggaa
gggaggggtgcccaagttgtatgcaaaggaaacagacagtatcttcagctcaaccacaaa
accagtgatttgttcctgcttgagaaattggatcgggaagagctatgtggcctcacagag
ccatgtacactgcgttttcagatactgctgcaaaaccctttgcaatttattacgagtgag
ctccaggtcatagatataaatgaccattctccagtattctttgaaaatgaaatgcagctg
aaaatcttagaaaacactccaccaggaacagtaattcctttgggaaatgctgaggatttg
gatgtgggaagaaacagtgtccaaaattacacaatctctcctaatgaacatttccatgta
ctcacacgtagccgtagggatgggagaaaatacccagaactagtgctggacaaagcgctg
gaccgagaagagcagccagtgctggatttaacgctaacagcactagatggtggttctcca
caacgctctggcacagcccagattcacatactggtctcagatataaatgataatgctcca
gaatttacgcagccactctatgaagttcaagttctggagaacagccccattaactctgtt
attctcactgtctcagcttctgattcagatacaggacattttggaacaatatcatatgca
ttttctcatgctgaggaagaaattcgcaacacttttcgactaaatccaattactggtgat
atccagctagtcaaatatttgaattttgaggcaattaatacttatgaagtcgacattgaa
gccaaggatggtggggggctctcaggaaaatcaacagtgatagttcaggtagttgatgta
aatgataatccgccagaactgaccttgtcatcaataaccaacccaatcccagagaactca
ccagagaccatcgtggccattttcagcgtttctgatctagactctggagagaatgggaga
ataacatgttccatagagaacgatctccccttctttctgaagccctctgtagaaaacttt
tataccttattgtcagaaggagcgctggaccgagagagtcaggcagagtacaacatcacc
atcacggtgacagacatgggcacccccaggctgcaaacgcagcacaccatcacagtgcta
gtgtctgacgtgaacgacaacgcccccgccttcagccagccctcctacaccctgctggtg
ggcgagaacaacagccccgcactgcacataggcagcgtgagcgccactgaccccgacgcg
ggcagcaacgcccaggtgacctactcgctgctgccttcccaagacccacagctgccgctc
gcctcgctggtgtccatcaacgccgacaacgggcagctattcgcgctgcgctcgctggac
ttcgaggccgtacgcgccttcgagttcggcgtgggcgcgtgggaccgcggctcgcccgcg
ctcagcagccaggtgcgggtgcgcgtgctggtgctggaccgcaacgacaacgcgcccttc
gtgctgtacccgctgcagaacgcgtcggcgccctgcagcgagctggtgcccagggcggca
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgct
tggctgtcgttccagctgctcaaggccacggagcctgggctcttcagcgtgtgggcgcac
aatggcgaggtgcgcactgcgcggccgctcagcgagcgcgatgcgcccaagcacaggctg
ctggtgctggtcagggacaatggcgagccgccgctgtcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagcccttcctgccactgcccgacgcgccgtccgacgcg
ccttcagatgaccgcctcaccgtctacctggtggtggccttggcctgcgtgtcgtcgctc
ttcctcttctccctgctggccttcgtgaccgtgcgcctgtgcaggcaggctggcccgccc
gctgggggcccctacccgctgcctgacgctcacttcccgggacacctgctggacgtcagc
ggtgctgggaccctgtcgcacagctaccagtatgaggtgtgcatgactggagaccctaga
actggtgagttcaaattccagaagccattattccccaatctgttggttcaggacaccaag
aatgaaattaaagaatctcccagcagcacaaacagctttgtatttagttaa
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