Sorex fumeus (smoky shrew): 130032943
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Entry
130032943 CDS
T10594
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum01521
EGFR tyrosine kinase inhibitor resistance
sfum04010
MAPK signaling pathway
sfum04014
Ras signaling pathway
sfum04015
Rap1 signaling pathway
sfum04020
Calcium signaling pathway
sfum04072
Phospholipase D signaling pathway
sfum04151
PI3K-Akt signaling pathway
sfum04510
Focal adhesion
sfum04518
Integrin signaling
sfum04540
Gap junction
sfum04630
JAK-STAT signaling pathway
sfum04810
Regulation of actin cytoskeleton
sfum05165
Human papillomavirus infection
sfum05200
Pathways in cancer
sfum05206
MicroRNAs in cancer
sfum05214
Glioma
sfum05215
Prostate cancer
sfum05218
Melanoma
sfum05230
Central carbon metabolism in cancer
sfum05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130032943 (PDGFRB)
04014 Ras signaling pathway
130032943 (PDGFRB)
04015 Rap1 signaling pathway
130032943 (PDGFRB)
04630 JAK-STAT signaling pathway
130032943 (PDGFRB)
04020 Calcium signaling pathway
130032943 (PDGFRB)
04072 Phospholipase D signaling pathway
130032943 (PDGFRB)
04151 PI3K-Akt signaling pathway
130032943 (PDGFRB)
09133 Signaling molecules and interaction
04518 Integrin signaling
130032943 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130032943 (PDGFRB)
04540 Gap junction
130032943 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130032943 (PDGFRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
130032943 (PDGFRB)
05206 MicroRNAs in cancer
130032943 (PDGFRB)
05230 Central carbon metabolism in cancer
130032943 (PDGFRB)
05231 Choline metabolism in cancer
130032943 (PDGFRB)
09162 Cancer: specific types
05214 Glioma
130032943 (PDGFRB)
05218 Melanoma
130032943 (PDGFRB)
05215 Prostate cancer
130032943 (PDGFRB)
09172 Infectious disease: viral
05165 Human papillomavirus infection
130032943 (PDGFRB)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
130032943 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sfum01001
]
130032943 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sfum04090
]
130032943 (PDGFRB)
Enzymes [BR:
sfum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
130032943 (PDGFRB)
Protein kinases [BR:
sfum01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
130032943 (PDGFRB)
CD molecules [BR:
sfum04090
]
Proteins
130032943 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
ig
I-set
Ig_2
V-set
VEGFR-1-like_Ig-like
TrmE_N
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
130032943
NCBI-ProteinID:
XP_055980596
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MRPPSPRPAPVLLGPMLLLLLLLLPAPATSTLLITPPGPELVLNFSSTLVLTCVGSAPVV
WERMSQVPQQETAQTQNATFSSRLTLANVTGLDTGEYFCVSKGSGGPESGERTRLYVFVP
DPTVGFLPATAEELFIFLTEVTENTTIPCRVTDPTLVVTLHEKKVDVPLPVPYDHQRGFT
GSFEDKSYICKTTIGDKEVDSEPYYVYSLQVSSINVSVNAVQTVVRQGENITIMCIVTGN
EVVNFEWTYPRLESGRVVEPVTDFLFNTPSHIRSILNIPNAELGDSGTYICNVSESVNDH
RDEKDVNITVVESGYVRLLQELDTVQFAELHRSRSLQVVFESYPPPTVVWFKDNRTLGDS
SAGEIVLSTRNVSETRYVSELTLVRVKVAEAGRYTMRAFHEDAEAQLSFLLQVNVPVRVL
ELSESHPASGEQTVRCRGRGMPQPHLTWSTCSDLKRCPRELPPTLLANLSEAESQLETNV
TYQAEEKEFEVVSTLRLARVDRPLAVRCTLRNLLGQDMQEVTVVPHALPFKVVVISAILA
LVVLTVVSLIILIMLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWELPRDQL
VLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGP
HLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQLRSDKRPSLSSQLYTNAL
PSPVSLPGESDGGYMDMSKDESVDYVPMLDMKGDVRYADIESSPYLAPYDNYVPSAPERT
YRATLINDSPMLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFG
LARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPYPE
LPMNEQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLERLLGEGY
KKKYQQVDEEFLRSDHPAVLRSQARLPGFHGSRSPLGTSSVLYTAVQPNTGDSDYIIPLP
DPKPEVAEEGPLEGSPSLASSTLNEVNTSSTISCDSPLEPQEEPEADPQPQGEPQAQPER
QPEASCPAWQAEGEDSFL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccccgagtcccaggccagctcctgtcctcctaggcccgatgcttctgctgctt
ctcctgctgctgccggcgcctgccacctccaccctgctcatcacacccccagggccggag
ctcgtcctcaacttctccagcaccctggtcctgacctgcgtggggtcggcccccgtggtg
tgggaacggatgtcccaagtgccgcagcaggaaacggcccagacccagaacgccaccttc
tccagccggctgacgctggccaacgtcaccgggctggacacgggagaatacttctgcgtc
tccaaaggctccgggggaccagagtcgggggagcgcacgcggctctatgtcttcgtgcca
gatcccaccgtgggcttcctccccgccaccgccgaggagctcttcatcttcctcacggaa
gtaacagagaataccaccattccgtgccgggtgacggaccccacgctggtagtgacgctg
cacgagaagaaagtggacgtgccgctgcctgtcccttatgatcaccaacgcggcttcacc
ggcagctttgaggacaagagctacatttgcaagaccaccatcggcgacaaggaggtggac
tcggagccatactatgtctacagcctccaggtgtcatccatcaacgtgtccgtgaatgca
gtgcagaccgtggtccgccagggcgagaacatcaccatcatgtgcattgtgacggggaat
gaggtggtcaactttgagtggacatatccccgtctggagagtggacgggtggtggagccc
gtgaccgacttcctcttcaacacaccctcccacatccgctccatcctcaacatccccaac
gctgagctgggagactcggggacctacatctgcaacgtgtctgagagtgtgaacgaccac
cgcgatgaaaaggacgtcaacatcaccgtggtggagagcggctacgtgcggctgctgcag
gagctggacactgtccaattcgccgagctgcatcgcagccgcagcctacaggtggtgttt
gagtcctacccaccgcccaccgtcgtgtggttcaaggacaaccgcaccctgggagactcc
agcgccggcgagatcgtgctgtccacacgcaatgtatctgagacccggtatgtatcagaa
ctgaccttggtgcgggtgaaggtggccgaggctggtcgctacaccatgcgggccttccac
gaggacgcagaggcccagctgtcttttctgctgcaggtgaacgtgcccgtgcgagtgctg
gagctgagtgagagtcacccagccagcggggagcagacggtgcgctgtcgaggccggggc
atgccccagccgcacctgacctggtctacctgcagcgacctcaagaggtgtccgcgcgag
ctgccgcccacgctgctggccaacctttctgaggccgagagccagctggagacgaatgtg
acgtaccaggcggaggagaaggagttcgaggttgtgagcaccctgcgcctggcccgcgtg
gaccggccgctggccgtgcgctgcacgctgcgcaatctgctgggccaggacatgcaggag
gtcacggtggtgccacatgctctgcccttcaaggtggttgtgatctcagccatcctggcc
ttggtggtcctcacggtcgtctccctcatcatcctcatcatgctctggcagaagaagccg
cgctacgagatccgctggaaggtgattgagtccgtgagctccgacggccatgagtacatc
tacgtggaccccatgcagctgccttacgactcaacctgggagctgccaagggaccagctt
gtgctgggacgcaccctgggctctggcgccttcgggcaggtggtggaggccacagctcac
ggcctgagtcactcgcaggccaccatgaaagtggccgtcaagatgctgaaatccaccgcg
cgcagcagcgagaagcaggcacttatgtcagagctgaagatcatgagtcacctggggccg
cacctgaacgtggtcaacctgctgggagcctgcaccaaaggagggcccatctacatcatc
accgagtactgccgctacggggacctggtggattacctgcaccgtaacaagcacaccttc
ctgcagctccgctctgacaagcggccctcgctcagcagccagctctacaccaatgccctg
cccagccccgtgtccctgcctggggagagtgatgggggctacatggacatgagcaaggac
gagtcggtggactacgtgcccatgctggacatgaaaggggacgtcagatatgccgacatc
gagtcctccccctacctggcgccttacgacaactacgtcccctccgctcccgagaggacc
taccgggccaccttgatcaacgactcccccatgctcagctacacagacctcgtgggcttc
agctaccaggtggccaatggcatggagttcctggcctccaagaactgtgtccaccgagat
ctggcagcgaggaacgtgctcatctgcgagggcaagctggtgaagatctgtgacttcggc
ctggcccgagacatcatgcgagactccaactacatctccaaaggcagcaccttcctgcct
ctcaagtggatggcgcccgagagcatcttcaacagcctctacaccaccctgagtgacgtg
tggtcctttgggattctgctctgggagatcttcacgctgggtggcacaccttacccggag
ttgccaatgaacgagcagttctacaatgccatcaagcggggctaccgcatggcccagcct
gcgcacgcctccgatgagatctatgagatcatgcagaagtgctgggaagagaagtttgag
atccggccccccttctcacagctggtgctcctgcttgagcggctcctgggcgagggctat
aagaagaagtaccagcaggtggatgaggagttcctgagaagcgaccacccagctgtcctt
cgctcccaagcccgcctgcccggcttccacggctcccgctcccccctgggcaccagctct
gtgctttacacggccgtgcagcccaacacaggcgacagcgactacatcatcccgctgccc
gaccccaagcctgaggtcgctgaagaggggcccctggagggctcccccagccttgccagc
tccaccctgaacgaagtgaatacgtcctcgaccatttcctgtgatagccccctggagccc
caggaggagccggaagcagacccccagcctcaaggagagccccaggcccagccggagcgg
cagccggaggccagctgtcccgcttggcaggccgagggggaggacagcttcctgtag
DBGET
integrated database retrieval system
