Sorex fumeus (smoky shrew): 130037710
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Entry
130037710 CDS
T10594
Symbol
SLC6A11
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04082
Neuroactive ligand signaling
sfum04721
Synaptic vesicle cycle
sfum04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130037710 (SLC6A11)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
130037710 (SLC6A11)
04721 Synaptic vesicle cycle
130037710 (SLC6A11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfum02000
]
130037710 (SLC6A11)
Transporters [BR:
sfum02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
130037710 (SLC6A11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
130037710
NCBI-ProteinID:
XP_055985597
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MTADQALPLGNGQAAEEAREAGAPGGCAVAAAAAARAPRDKAVHERGHWNNKVEFVLSVA
GEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRK
VCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWATCGHEWNTERCVEFQ
KLNASNHSHVALQNATSPVMEFWERRVLAISDGIEHIGELRGELALCLLAAWTVCYFCIW
KGTKSTGKVVYVTATFPYIMLLVLLIRGVTLPGASEGIKFYLYPDLSRLSDPQVWVDAGT
QIFFSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQG
VPIAEVAESGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAVVD
MYPEVFRRGYRRELLILALSVVSYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFEC
VCIGWVYGSNRFYDNIEDMIGYRPLSLIKWCWKVVTPGICAGIFIFFLVKYKPLKYNNVY
TYPAWGYGIGWLMALSSMLCIPLWVCLKLWKTEGTLAEKFQKLTVPSADLKMRGRLGAGP
RTVTVNDCEAKLKGDGAIAAITEKETRF
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggaccaggcgctgccgctgggcaacgggcaggcggccgaggaggcgcgcgag
gccggggcgccggggggctgcgcggtggcggcggcggcggcggcgcgggccccgcgcgac
aaggcggtgcacgagcgcggccactggaacaacaaggtggagttcgtgctgagcgtggcg
ggcgagatcatcgggctgggcaacgtgtggcgcttcccctacctgtgctacaagaacgga
ggaggggccttcctgatcccctacgtggtgtttttcatctgctgcgggatccccgtgttc
ttcctggaaacggccctgggccagttcaccagcgagggcggcatcacctgctggaggaag
gtctgccctttatttgaagggatcggctacgccacgcaggtgatcgaggcgcacctcaac
gtctactacatcatcatcctggcctgggccatcttctacttgagtaactgcttcaccacc
gagctgccctgggccacgtgcggccacgagtggaacacggagcgctgtgtggagttccag
aagctgaacgccagcaaccacagccacgtggccctgcagaacgccacctcccccgtcatg
gagttttgggagcgccgcgtgctggccatctcagatgggatcgagcacatcggggagctc
cgcggggagctggccctgtgtctcctggcggcctggaccgtctgctacttctgcatctgg
aaggggaccaagtccacgggcaaggtcgtgtacgtcaccgccacgttcccctacatcatg
ctgctggtcctcctgatccgaggggtgacgctgcccggtgcctcggaaggcatcaagttc
tacctgtaccccgacctctcccggctgtccgacccgcaggtgtgggtggacgccggcacg
cagatcttcttctcctacgccatctgcctgggctgtctgacggcgctggggagttacaac
aactacaacaacaactgctacagggactgcatcatgctctgctgtctgaacagcggcacc
agcttcgtggccggcttcgccatcttctcggtcctgggcttcatggcgtacgagcagggg
gtgcccatcgcggaggtggccgagtcgggccccggcctggccttcatcgcctaccccaag
gccgtgaccatgatgccgctgtccccgctgtgggcgaccctcttcttcatgatgctcatc
ttcctgggcctggacagccagttcgtgtgtgtggagagcctggtgacggccgtggtggac
atgtaccccgaggttttccgcaggggctaccggcgggagctgctcatcctggccctgtcc
gtggtgtcctacttcctgggcctcgtcatgctgacggagggcggcatgtacatcttccag
ctctttgactcgtacgcggccagcggaatgtgcctcctattcgtggccatcttcgagtgc
gtctgcatcggctgggtgtacggcagcaaccgcttctacgataacatcgaagacatgatt
ggctaccggccgctgtctctcatcaagtggtgctggaaggtggtgacccccgggatctgt
gcgggcatcttcatcttcttcctggtcaagtacaaaccgctcaagtacaacaacgtctac
acgtacccggcctggggctacggcatcggctggctcatggccctgtcgtccatgctctgc
atcccgctctgggtctgcctcaagctgtggaagacggaaggcaccctggcggagaaattc
cagaagcttacggtccccagcgccgacctgaaaatgcgcggcagactcggggccggcccg
cggacggtgacggtgaacgactgtgaagccaaactcaagggcgacggggcgatcgcggcc
atcacagagaaggagacgcgcttctga
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