Sorex fumeus (smoky shrew): 130042833
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Entry
130042833 CDS
T10594
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130042833 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfum03036
]
130042833 (TRIP13)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
130042833 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_16
AAA_22
nSTAND3
AAA_18
AAA_25
Cytidylate_kin
AAA_28
AAA_14
Viral_helicase1
AAA_24
NPHP3_N
IstB_IS21
AAA_5
RNA_helicase
TsaE
DUF815
RuvB_N
ABC_tran
AAA_11
NACHT
AAA_30
ATPase_2
AAA_17
AAA_7
bpMoxR
TIP49
AAA_33
Zot
AAA_19
Mg_chelatase
Rad17
NB-ARC
nSTAND1
Sigma54_activat
PduV-EutP
PhoH
NTPase_1
AAA_3
nSTAND6
Motif
Other DBs
NCBI-GeneID:
130042833
NCBI-ProteinID:
XP_055991049
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MDEAVGDLKQALSCVTDKPAVHVEVHQRASSTARMDDIRQRVQKLLNRHSIVFGDYTWTE
FDDPFLSRNVHSVAIVDTELKAKDLQPINLSACSVALHIFQLNEDGPSSENLEEEAENIV
AANHWVLPAAEFHGLWDSLVYDAEVKSHLLDYMMTTLLFSDKKVDSNLVAWNRVVLLHGP
PGTGKTSLCKALAQKLSIRLSGRFRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQDII
DDKDGLVFVLIDEVESLTAARSASRASAEPSDAIRVVNAVLTQIDQIQRHSNVVILTTSN
ITEKIDLAFVDRADIRQYIGPPSAAAIFKIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FIENNVSRLSLLLSDISRKSEGLSGRVLRKLPFLAHALYIQAPTVTIEGFLQALSLAVDK
QFEEKKQLSSCT
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggccgtgggcgacctgaagcaggcgctgtcctgcgtgaccgacaagcccgcg
gtgcacgtagaggtgcaccagcgcgccagcagcaccgccaggatggacgacataaggcag
agagtccagaagctgctcaaccgacacagcattgtgttcggggactacacctggaccgag
tttgacgaccctttcctgagcaggaacgtgcactcagtggccatcgtggacacggagctg
aaggcaaaagacctccagcccatcaacctgagcgcctgctccgtggcactccacatcttc
cagctgaatgaggacggcccgagcagtgagaacctggaggaagaggccgagaacatcgtc
gccgccaaccactgggtgctgccggcagccgagttccacgggctctgggacagcctggtg
tatgacgcagaggtcaagtcacatctcctggactacatgatgacgacactgctgttctca
gacaagaaggtggacagcaacttggtggcctggaaccgtgtggtgctgctgcatgggccc
ccagggaccgggaagacgtcactgtgcaaagctctggcccagaagctgagcattcggctc
tccggcaggttccggtatgggcagctgatcgagatcaacagccacagcctgttctccaag
tggttctcagagagtggcaagctggtgaccaagatgttccagaagattcaggacataatc
gatgacaaagacgggctggtgtttgtgctcatcgacgaggtggagagcctcaccgctgcc
cgcagcgccagcagggcgagtgcagagccctccgacgccatccgtgtggtgaacgcagtc
ctcacccagatcgaccagatccagaggcactccaatgtggtgatcctgaccacgtctaac
atcactgagaagatcgacctggcctttgtggaccgtgcggacatcaggcagtacatcggg
ccgccctcagccgctgccatcttcaagatctacctctcgtgtttggaggagctgatgaag
tgccagatcatctacccgcggcagcagttgctgacgctgcgtgagctggagatgatcggc
ttcatcgagaacaacgtgtccaggctgagtctactgctgagtgacatctccaggaagagt
gagggcctcagtggccgcgtcctgcggaagctgcctttcctggcccacgccctgtacatc
caggcccccacggtcaccatcgagggcttcctccaggccctctcactggcagtggacaag
cagtttgaggagaagaagcagctgtcgtcctgcacgtga
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