Shigella flexneri 8401 (serotype 5b): SFV_0386
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Entry
SFV_0386 CDS
T00377
Symbol
ispA
Name
(GenBank) geranyltranstransferase (farnesyldiphosphate synthase)
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00900
Terpenoid backbone biosynthesis
sfv01100
Metabolic pathways
sfv01110
Biosynthesis of secondary metabolites
Module
sfv_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SFV_0386 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sfv01006
]
SFV_0386 (ispA)
Enzymes [BR:
sfv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SFV_0386 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SFV_0386 (ispA)
Prenyltransferases [BR:
sfv01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SFV_0386 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Arm-DNA-bind_3
UbiA
Motif
Other DBs
NCBI-ProteinID:
ABF02658
UniProt:
Q0T7G8
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All DBs
Position
complement(403673..404572)
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AA seq
299 aa
AA seq
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MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFG
VSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTL
AFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRH
KTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQG
ADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSPDTSALEALADYIIQRNK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggactttccgcagcaactcgaagcctgcgttaagcaggccaaccaggcgctgagccgt
tttatcgccccactgccctttcagaacactcccgtggtcgaaaccatgcagtatggcgca
ttattaggtggtaagcgcctgcgacctttcctggtttatgccaccggtcatatgtttggc
gttagcacaaacacgctggacgcacccgctgctgccgtagagtgtatccacgcttactca
ttaattcatgatgatttaccggcgatggatgatgacgatctgcgtcgcggtttgccgacc
tgccatgtgaagtttggcgaagcaaacgcgattctcgctggcgacgctttacaaacgctg
gcgttctcgattctaagcgatgccaatatgccggaagtgtcggatcgcgacagaatttcg
atgatttctgaactggcgagcgccagcggtattgccggaatgtgcggtggtcaggcatta
gatttagacgcggaaggcaaacacgtacctctggacgcgcttgagcgtattcatcgtcat
aaaaccggcgcattgattcgcgccgccgttcgccttggtgcattaagcgccggagataaa
gggcgtcgtgctctgccagtactcgacaagtacgcagagagcatcggccttgccttccag
gttcaggatgacatcctggatgtggtaggagatactgcaacgttgggaaaacgccagggt
gccgaccagcaacttggtaaaagtacctaccctgcacttctgggtcttgagcaagcccgg
aagaaagcccgggatctgatcgacgatgcccgtcagtcgctgaaacaactggctgaacag
tcacccgatacctcggcactggaagcgctagcggactacatcatccagcgtaataaataa
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