Shigella flexneri 8401 (serotype 5b): SFV_1550
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Entry
SFV_1550 CDS
T00377
Symbol
ydfH
Name
(GenBank) conserved hypothetical protein
KO
K22293
GntR family transcriptional regulator, rspAB operon transcriptional repressor
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfv03000
]
SFV_1550 (ydfH)
Transcription factors [BR:
sfv03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SFV_1550 (ydfH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
Imm49
FadR_C
Fe_dep_repress
TrmB
HTH_11
Rrf2
TFIIE_alpha
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ABF03729
UniProt:
Q0T4N6
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All DBs
Position
complement(1588777..1589415)
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AA seq
212 aa
AA seq
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MYSILSRDIVHCLIAPGTPLSEKEVSVRFNVSRQPVREAFIKLAENGLIQIRPQRGSYVN
KISMAQVRNGSFIRQAIECAVARRAASMITESQCYQLEQNLHQQRIAIERKQLDDFFELD
DNFHQLLTQIADCQLAWDTIENLKATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDG
DAVERAMTQHLQEISESVRQIRQENSDWFSEE
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtattcttagtcgcgacattgtccattgcctgattgcaccaggcacaccgttg
tcggaaaaagaagtttctgttcgtttcaatgtgtcacgccagccggttcgtgaagccttt
attaaactggcggaaaacggcctgattcaaattcgtccgcagcgtggcagctacgtcaac
aaaatttccatggcccaggtgcgcaacggcagttttatccgtcaggccattgagtgcgcg
gtggcgcgtcgggcggcgagcatgattaccgaaagccagtgctaccaactggaacaaaat
cttcaccagcaacgcattgccattgagcgcaagcaactggatgatttttttgaacttgat
gacaacttccatcaactcctgacgcagattgccgactgtcaactggcgtgggataccatt
gagaacctgaaagcgaccgttgatcgcgtgcgctatatgagtttcgaccatgtttctcca
ccagaaatgctgttacgccagcatcttgatattttctctgccctgcaaaaacgtgatggc
gatgcggtagaacgtgcaatgacgcaacatttgcaggaaatcagcgaatccgtgcgccag
atccgccaggaaaacagcgactggtttagcgaagagtaa
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