Shigella flexneri 8401 (serotype 5b): SFV_2536
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Entry
SFV_2536 CDS
T00377
Symbol
hyfR
Name
(GenBank) putative 2-component regulator, interaction with sigma 54
KO
K12146
hydrogenase-4 transcriptional activator
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfv03000
]
SFV_2536 (hyfR)
Transcription factors [BR:
sfv03000
]
Prokaryotic type
Helix-turn-helix
Other families
SFV_2536 (hyfR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
AAA_5
GAF_3
Mg_chelatase
AAA
HTH_8
MCM
AAA_2
AAA_22
AAA_7
Parvo_NS1
AAA_16
ResIII
AAA_3
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ABF04637
UniProt:
Q0T228
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All DBs
Position
2595896..2597842
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AA seq
648 aa
AA seq
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MLAERLAQKHGKASLLRAFIPLPPPFSPVQLIELHVLKSNFYYRYHDDGSDVTATTEYQG
EMVDYSRHAVLLGSSGMAELRFIRTHGSRFTPQDCTLFNWLARIITPVLQSWLNDEAQQV
ALRLLEKDRDHHRVLVDITNAVLSHLDLDDLIADVAREIHHFFGLASVSMVLGDHRKNEK
FSLWCSDLSASHCACLPHNMPGDSVLLTQTLQTRQPTLTHRADDLFLWQRDPLLLLLASN
GCESALLIPLTFGNHTPGALLLAHTSSTLFSEENCQLLQHIADRIAIAVGNADACRRMTD
LQESLQQENHQLSEQLLSNLGVGDIIYQSQAMEDLLQQVDIVAKSDSTVLICGETGTGKE
VIARAIHQLSPRHDKPLVKINCAAIPASLLESELFGHDKGAFTGAINTHRGRFEIADGGT
LFLDEIGDLPLELQPKLLRVLQEREIERLGGSRTIPVNVRVIAATNRDLWQMVEDRQFRS
DLFYRLNVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRSIDAIPTEALRQLMSWDWPG
NVRELENVIERAVLLTRGNSLNLHLNVRQSRLLPTLNEDSALRSSMAQLLHPTTPENDEE
ERQRIVQVLRETNGIVAGPRGAATRLGMKRTTLLSRMQRLGISVREVL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcggagcggttagcgcagaaacacggcaaggcgtctttattacgcgccttcatc
ccgctgccgccgccgttcagcccggtacaacttattgaactgcatgttctcaaaagcaac
ttctattaccgctaccatgatgatggcagcgatgtgacggcaacaacagagtatcagggc
gagatggtcgattattcgcgtcacgccgtccttctcggcagtagtggaatggcggagcta
cgctttattcgtacccacggcagccgttttactccccaggattgcacactgtttaactgg
ctggcacgcattatcaccccggttctgcaatcatggctcaatgatgaagcacagcaggtg
gcgctgcgtttgctggagaaagatcgcgatcatcatcgggtactggtggatatcactaat
gcagtgctgtcacatcttgatctcgacgatctgatcgctgacgtcgctcgtgagatccat
cattttttcggtctggcttcagtcagtatggtactgggcgatcatcgaaagaacgagaag
ttcagcctgtggtgcagcgatctttctgcctcacattgtgcgtgtctgccacacaatatg
cctggcgacagtgtattgctgacacaaacgctacaaacccgacaaccgaccttgacgcac
cgtgcagatgatctgtttctctggcaacgcgacccgttattactcttacttgcatctaac
ggctgcgaatctgcgctccttataccgcttacctttggcaaccatacaccgggtgcattg
ttgctggcgcatacctcttccactctctttagtgaggaaaactgccagctactacaacac
atagccgatcgcatcgctattgccgttggcaatgccgatgcctgccgtagaatgaccgat
ttgcaggaaagtttgcagcaagaaaaccaccagcttagcgagcagctcctttcgaatctg
ggcgtcggtgacattatctatcaaagccaggcaatggaagacctgctccagcaggtagat
attgtggcgaagagcgacagtacggtgttgatttgcggtgaaaccggaaccggcaaagag
gtgatcgccagagcgatccatcaacttagcccgcgacacgacaagccgctggtcaaaatc
aactgcgctgccatccccgccagtcttctggaaagtgagttattcggtcatgacaaaggg
gcgtttactggtgcgattaatacccatcgtggtcgttttgaaattgccgatggcggcacg
ttgtttctcgatgaaattggcgatctgccgttagaacttcagcctaaactgctgcgcgta
ttgcaggaacgggagattgagcgtctcggcgggagtagaacgatcccggtaaatgtcaga
gtcattgccgccaccaaccgtgatttgtggcaaatggttgaagatcgccagtttcgcagc
gatctcttttatcgcctgaatgtcttcccactggaattgcctccgctgcgcgaccgtccg
gaagatatccctcttttagcaaagcatttcacgcaaaaaatggcgcgccatatgaatcgt
tcaattgacgccatcccgaccgaggcgctacgccagttgatgtcgtgggactggccgggc
aacgtgcgcgagctggaaaacgtgattgagcgagcggtactgctgactcgcggtaacagt
ctgaatttacatcttaatgtccgacaaagccgtttactgccgacgctaaatgaagattca
gcgcttcgcagttcaatggcgcagttgctgcacccgacgacgccagagaatgacgaagaa
gaacgtcagcgcattgttcaggtattgcgagaaaccaatggcattgttgccgggccccgt
ggcgcggcgacacgattagggatgaagcgcaccacgctgctgtcacgaatgcagcgtctg
ggaatctcggttcgcgaggtgttgtaa
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