Spiroplasma floricola: SFLOR_v1c00640
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Entry
SFLOR_v1c00640 CDS
T05283
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sfz
Spiroplasma floricola
Pathway
sfz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sfz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SFLOR_v1c00640 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfz03400
]
SFLOR_v1c00640 (uvrB)
DNA repair and recombination proteins [BR:
sfz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SFLOR_v1c00640 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SFLOR_v1c00640 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
P-loop_SecA
AAA_7
AAA_22
UB2H
AAA_30
GnHR_trans
DUF87
AAA_16
AAA_19
AAA
Motif
Other DBs
NCBI-ProteinID:
AUB31125
UniProt:
A0A2K8SCT6
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All DBs
Position
63513..65498
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AA seq
661 aa
AA seq
DB search
MENLKQKFELVTDYKPSGDQPNAIIKLIDGLKNNVKNQVLMGATGTGKTFTMANVIKEIN
KPTLVLAHNKTLAMQLYIELKELFPNNRVEYYVSNFDFYQPEAYIPSRDLYIDKDAKRNN
DLEMMRLSAMNALMIRKDTIVVASVACIYATQDPKEYGDVFFELQVGQVLSKKDLLTFLV
QTGYTRDENDLAMGYFSAKGDVIRIAPSWTDKYHIRISMFGEEIESIEMIDILNNHVLEK
LRMFTVYPAAAYVTNFDKMKLVVENIGKELEQRVIWFQDQKKFIEADRLMKRTKYDMETM
SEFGICSGIENYSPHLDFRAPGVPPFTLIDYFGDDFLTIIDESHMMIPQLNAMYNTDRSR
KETLIEHGFRLPSAIDNRPLKFEEFVGKLKNVIYTSATPGPYELELTENKVIEQIIRPTG
LVDPQIEIRSTINQMNDIVDEINNVVKKGQKVFITAITIRISEDITTYLQSRNIKVAYLH
SELKTLERNQVLTDLRKGVYDVIVGVNLLREGLDVPEVSLVCILDADKQGFLRNTRSLIQ
TIGRAARNSEGRVIFYADSTSQAMKEAIEETDRRRKIQEEYNAVHGITPKTIIKKISDII
SDSAIRNKVDELKKLKRKDKEKKKEDFISDLRKQMLTAAKEQNYEKAAELRDLILELQAE
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttaaaacaaaaatttgaattggtcactgattataaacccagtggggatcaa
ccaaatgcaattataaaattaattgatggcttaaaaaataatgttaaaaaccaagtatta
atgggtgcaacaggtacaggaaaaacttttacaatggcaaatgttattaaagaaataaat
aagccaaccttagttttagcacacaataaaactttggcaatgcaattgtatatagaatta
aaagaactatttccaaataatagagtagaatattatgtttcaaattttgatttttatcag
cctgaagcatatattccctcaagagatttatatattgataaagatgcaaaaagaaataat
gatttggaaatgatgagattaagtgctatgaatgcattaatgattagaaaagatacaata
gttgtcgcatcagttgcttgtatttatgcaactcaagatccaaaggaatatggagatgta
ttttttgaactacaagttggtcaagttttatctaaaaaagatttattaacttttttagtt
caaacaggatatacaagagatgaaaatgatcttgcaatgggatattttagtgcaaaaggt
gatgtaattagaattgcacctagctgaactgataaatatcatattagaatttctatgttt
ggtgaggaaatagaatctatagaaatgatagatattttaaacaatcatgttttagaaaaa
ttaagaatgtttacagtttatcctgctgcagcttatgtgactaattttgacaaaatgaaa
ttagttgtggaaaatattggaaaagaacttgaacaaagagttatatgatttcaagatcag
aaaaaatttattgaagcagatagattaatgaaaagaacaaaatatgatatggaaacaatg
agcgagtttggaatctgtagtggaatagaaaattactctcctcatttggattttagagct
ccaggtgttcctccttttacattaatagattattttggagatgattttttaacaattatt
gatgaatcacatatgatgattcctcaattgaatgcaatgtacaatacagatagaagtaga
aaagaaactttaattgagcatggatttagattaccaagtgcaattgataatagaccactt
aaatttgaagaatttgtaggaaaattaaaaaatgtaatttatacttcagctacacctgga
ccctatgaattagagttaacagaaaataaagttattgaacaaataattagacctactggt
ttagttgatccacaaattgaaattcgctcgactataaatcaaatgaatgatatagttgat
gaaataaataatgttgtaaaaaaaggacaaaaagtttttataactgctattacaattaga
atttctgaagatattacaacttatttacaatcaagaaatataaaagttgcttaccttcat
tctgaattaaaaactttagaaagaaatcaagttttaacagatttaagaaaaggagtttat
gatgttattgttggagttaacttattaagagaaggtttagatgtacctgaagtaagtctt
gtctgtattttggatgcagataaacaaggttttttaagaaatactagaagtttaattcaa
acaattggtagagctgcaagaaactcagagggtagagttatattttatgcagattcaact
tctcaagctatgaaagaagctattgaagaaactgacagaagaagaaaaattcaagaagaa
tataatgcagttcatggaataactccaaagacaattatcaaaaaaatatcagatattatt
tctgattcagcaattagaaataaagttgatgagttaaaaaaattaaaaagaaaagacaag
gaaaagaaaaaagaagattttatttcagatttaagaaaacaaatgttaactgcggcaaaa
gaacaaaattatgaaaaagctgcagaacttagagatcttattttagaactacaagcagaa
agttag
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