Streptomyces griseorubiginosus: DWG14_02226
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Entry
DWG14_02226 CDS
T06099
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sge
Streptomyces griseorubiginosus
Pathway
sge03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DWG14_02226 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sge03019
]
DWG14_02226 (recQ_1)
03400 DNA repair and recombination proteins [BR:
sge03400
]
DWG14_02226 (recQ_1)
Enzymes [BR:
sge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DWG14_02226 (recQ_1)
Messenger RNA biogenesis [BR:
sge03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DWG14_02226 (recQ_1)
DNA repair and recombination proteins [BR:
sge03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DWG14_02226 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
AAA_22
DUF8096
Motif
Other DBs
NCBI-ProteinID:
AYC38007
UniProt:
A0AAI8KY62
LinkDB
All DBs
Position
2572419..2574599
Genome browser
AA seq
726 aa
AA seq
DB search
MGGMTHTSKDELREAADGILARLVGDSTGSARLREDQWRAIEALVADKRRALVVQRTGWG
KSAVYFVATALLRERGAGPTVIVSPLLALMRNQVDAAARAGIRARTINSSNPEEWETIRA
EVAAGTVDVLLVSPERLNNPDFRDNVLPELSAATGLLVVDEAHCISDWGHDFRPDYRRLR
TMLMELPSGVPVLATTATANARVTADVAEQLGTGSGSDALVLRGPLDRESLSLSVLQLPD
SAHRLAWLADHLSDLPGSGIIYTLTVAAAEEITAFLRECGHTVASYTGKTENAERQQAEE
ALLANKVKALVATSALGMGFDKPDLGFVVHVGSPSSPIAYYQQVGRAGRGVEHAEVLLLP
GREDEAIWSYFASVAFPPEEAVRRTLDALAGADRPLSLPALEPLVELNRTRLEIMLKVLD
VDGAVHRVKGGWIATGTPWSYDTERYAWVAKQRAAEQQAMRDYATAAGCRMEFLRRQLDD
EEAAPCGRCDNCAGPRFTADISPAALDTAGGSLARAGVVVEPRRMWPTGLPAIGVDLKGR
IPPGEQASPGRALGRLSDIGWGNRLRPLLAPQTPDAPVPDDVAHAVVTVLADWAKGPDGW
ASGSADSPARPVGVVTLPSRTRPQLVQSLGARISAVGRIPFLGSLGYTDHSDELSLPRSN
SAQRLRALHGALIVPPALREALEAAGGPVLLVDDMTETGWTLAVAARLLLRSGAQGVLPL
VLAVRG
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcatgacgcacacgagcaaggacgaactgcgcgaggccgctgacggcatcctc
gcccggctcgtcggggacagcaccggatcggcgcggttgcgcgaggaccagtggcgggcc
atcgaggcactcgtcgccgacaagcgccgcgctctggtcgtgcagcggacagggtggggc
aagtccgcggtgtacttcgtggcgacggccctgctgcgggagcgcggcgccggaccgacc
gtgatcgtctccccgctcctcgctctcatgcgcaaccaggtcgacgcggctgcacgagcc
ggcatccgggcccggaccatcaactcctccaacccggaggagtgggagaccattcgcgcc
gaggtcgccgcgggcaccgtggacgtgctgctggtgagccccgagcggctcaacaacccg
gacttccgcgacaacgtcctgcccgaactgtccgccgccaccggccttctggtcgtcgac
gaggcccactgcatctccgactggggacacgacttccgccccgactaccgcagactgcgg
accatgctcatggagctgccgtccggcgtgccggtgctcgccaccaccgccaccgctaac
gcccgtgtcaccgcggacgtggccgagcaactcggtacgggcagcggctcggacgcgctg
gtgctgcggggccccctcgaccgcgagagcctcagcctgtccgtgctccaactccccgac
tcggctcaccggctggcctggctggccgaccacctgagcgatctgccgggctccggaatc
atctacacgctcacggtggccgccgccgaggagatcaccgccttcctgcgtgagtgcggg
cacaccgtcgcctcgtacacgggaaagacggagaacgccgaacgccagcaggccgaggaa
gctctgctcgcgaacaaggtcaaggcgctggtcgccacgtccgcactcggcatgggcttc
gacaagccggacctcggcttcgtcgtccacgtcggttcgccttcgtcgcccatcgcctac
taccagcaggtgggacgcgccggacgtggtgtcgagcacgccgaggtgctgctcctgccc
ggccgtgaggacgaagcgatctggtcctatttcgcctcggtcgcgttcccccccgaggaa
gccgtacggcgcaccctcgacgccctggccggagcggaccggccgttgtcactgcccgcg
ctcgaaccgctggtcgaactgaaccggacccgcctggagatcatgctcaaggtgctcgac
gtggacggcgccgtccaccgggtcaagggcggctggatcgccaccggaacgccctggtcg
tacgacaccgagcgctacgcgtgggtcgccaagcagcgtgccgccgaacagcaggccatg
cgcgactacgccaccgccgcgggctgccgtatggagttcctacgacggcagctggacgac
gaggaagcggctccctgtggccgctgcgacaactgcgcagggccccgtttcaccgccgac
atctctccggccgcactggacacggcaggcggctcgctcgcccgggccggggtcgtggtg
gagccgcgccggatgtggcccaccgggctgcctgccatcggcgtcgacctcaagggccgt
attccgcccggggaacaggcctccccgggccgggccctcggacggttgtctgacatcggc
tggggcaaccggctgcgtccgctgctcgcgccccagaccccggacgcccccgttcccgac
gacgtggcccacgccgtcgtgaccgtgctggccgactgggcaaaggggcccgacggctgg
gcctccggctccgcggactcccccgcccgccccgtaggtgtggtcacgctgccctcgcgc
acccggcctcagctggtccagtcgctcggggcccggatctccgcggtcggccggatcccg
ttcctgggctccctgggctacacggaccactccgacgagctctcgctgccgcgctccaac
agcgctcagcgcctccgtgccctgcacggtgcgctcatcgtgcctccggccctgcgggag
gcacttgaggccgcaggcggtcccgtgctgctcgtcgacgacatgaccgagaccggttgg
accctcgccgtcgccgcccgactgctgttgcggtcgggtgcccagggggtgttgccgctg
gtgctggcggtacgtggctga
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