Streptomyces griseorubiginosus: DWG14_03472
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Entry
DWG14_03472 CDS
T06099
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sge
Streptomyces griseorubiginosus
Pathway
sge03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sge00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DWG14_03472 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sge03021
]
DWG14_03472 (rpoB)
03400 DNA repair and recombination proteins [BR:
sge03400
]
DWG14_03472 (rpoB)
Enzymes [BR:
sge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DWG14_03472 (rpoB)
Transcription machinery [BR:
sge03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DWG14_03472 (rpoB)
DNA repair and recombination proteins [BR:
sge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DWG14_03472 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AYC39239
UniProt:
A0A117PD57
LinkDB
All DBs
Position
complement(3984403..3987888)
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRTASTANTNNAASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNTAWQSRVEE
ALESGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKDRDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTHKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGAEAPLDAGILTVEDIISTIKYLVKLHAGETETVGDSGTNIVVETDDIDHFG
NRRLRSVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFVETPYRKVVDGQVTDEVDYLTADEEDRFVIAQANATLNDDMRF
EEARVLVRRRGGEVDYVPGDDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSEAPLVGTGMEYRSAVDAGDVVKAEKAGVVQEVSADYITTANDDGTYITYRLAK
FARSNQGTSVNQKVIIDEGDRVIEGQVLADGAATENGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVIAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLAEDWAQRLQAIGADSVAPGTNVATP
VFDGAREDELAGLLQHTIPNRDGERMVQPTGKARLFDGRSGEPFPDPISIGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcactgcctcgaccgcgaatacgaacaacgccgccagcacagccccg
ctgcgcatctcttttgcaaagatcaaggagcctctcgaggttcccaacctgctcgcgctg
cagaccgagagctttgactggctgctcgggaacaccgcctggcagagtcgggtcgaggag
gctctggagtcaggtcaggacgtccccaccaagtccggtctggaggagatcttcgaggag
atctccccgatcgaggacttctccgggtcgatgtcgctgacgttccgcgaccaccgtttc
gagccgccgaagaacagcatcgacgagtgcaaggaccgcgacttcacgtacgcggccccg
ctcttcgtgacggccgagttcaccaacaacgagaccggcgagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgacccacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtggtgtcgcagctggtccgctcgccgggtgtctacttcgactcctccatcgac
aagacgtccgacaaggacatcttctcggccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtccgcatcgaccgcaagcgcaagcag
tccgtcaccgtactcctgaaggctctcggctggaccaccgagcagatcctcgaggagttc
ggcgagtacgagtcgatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgcccgggcgagccgcccacgcgcgaggccgcg
cagacgcttctggagaacctgtacttcaacccgaagcgctacgacctcgccaaggtcggc
cgttacaaggtcaacaagaagctgggtgcggaagctccgctcgacgcgggcatcctgacc
gtcgaggacatcatctcgacgatcaagtacctggtgaagctgcacgcgggcgagaccgag
acggtcggtgacagcggcacgaacatcgtcgtcgagaccgacgacatcgaccacttcggc
aaccgccgtctgcgcagcgtcggcgagctcatccagaaccaggtccgcacgggtctggct
cgtatggagcgcgtcgtccgcgagcgcatgacgacccaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcgcagttcatggaccagaacaacccgctgtcgggtctcacccacaagcgccgt
ctgtcggctcttggcccgggtggtctctcccgtgagcgggccggcttcgaggtccgtgac
gtgcacccctcgcactacggccgcatgtgcccgatcgagacgcccgaaggcccgaacatc
ggtctgatcggctcgctcgcctcctacggccgcgtcaacgcgttcggtttcgtggagacg
ccgtaccgcaaggtcgtcgacggccaggtcaccgacgaggtggactacctgacggccgac
gaggaggaccgcttcgtcatcgcgcaggccaacgccacgctcaacgacgacatgcggttc
gaggaggcccgggtcctggtccgccgtcgtggcggagaggtcgactacgtccccggtgac
gacgtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatgatc
ccgttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgtcag
gccgtcccgctcatcaagagcgaggccccgctcgtcggcacaggcatggagtaccgctcc
gccgtcgacgccggcgacgtggtcaaggccgagaaggcgggtgtggtccaggaggtctcc
gcggactacatcaccaccgccaacgacgacggcacgtacatcacgtaccgcctggccaag
ttcgcccgctccaaccagggcacctcggtcaaccagaaggtcatcatcgacgagggcgac
cgcgtcatcgagggccaggtcctcgccgacggcgcggccaccgagaacggtgagatggcg
ctgggcaagaacctgctcgtggcgttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgcatcggtgcc
gaggtcatcgccggtgacatcctcgtcggcaaggtcacgcccaagggtgagaccgagctg
acgccggaggagcgcctgctgcgcgcgatcttcggtgagaaggcccgtgaggtccgtgac
acctcgctgaaggtgccgcacggcgagaccggcaaggtcatcggcgtccgcgtcttcgac
cgcgaggagggcgacgagcttccccccggtgtgaaccagctggtgcgcgtgtacgtggcg
cagaagcgcaagatcaccgacggtgacaagctcgccggtcggcacggcaacaagggtgtc
atctcgaagatcctgccgatcgaggacatgccgttcctggaggacggcaccccggtcgac
atcatcctcaacccgctgggtgtcccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccgcggctgggacgtctccggcctcgccgaggactgggcg
cagcgcctccaggcgatcggcgccgactccgtcgcccccggcaccaacgtcgcgaccccg
gtcttcgacggtgcccgcgaggacgagctggccggtctgctccagcacaccatcccgaac
cgggacggcgagcggatggtgcagcccaccggcaaggcgaggctgttcgacggccgctcc
ggtgagccgttcccggacccgatctcgatcgggtacatgtacatcctcaagctgcaccac
ctggtcgacgacaagctgcacgcccgctcgaccggtccgtactcgatgatcacccagcag
ccgctgggtggtaaggcccagttcggtggccagcgcttcggtgagatggaggtgtgggcg
ctggaggcttacggcgccgcgtacgccctccaggagctgctgaccatcaagtccgacgac
gtcaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacattcccgagccc
ggcatccccgagtccttcaaggtgctcatcaaggagatgcagtccctgtgcctcaacgtg
gaggtgctgtcctcggacggcatgtccatcgagatgcgcgacaccgacgaggacgtcttc
cgcgctgcggaagagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
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integrated database retrieval system
