Sinocyclocheilus grahami (golden-line barbel): 107550462
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Entry
107550462 CDS
T04918
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
sgh04260
Cardiac muscle contraction
sgh04261
Adrenergic signaling in cardiomyocytes
sgh04270
Vascular smooth muscle contraction
sgh04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107550462
04020 Calcium signaling pathway
107550462
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
107550462
09153 Circulatory system
04260 Cardiac muscle contraction
107550462
04261 Adrenergic signaling in cardiomyocytes
107550462
04270 Vascular smooth muscle contraction
107550462
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107550462
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107550462
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
107550462
NCBI-ProteinID:
XP_016087231
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MESGSGGVAALASFIMNEEELKRKQREKLKKLQATGGNPRPPRSLFFFTLKNPFRKTCIN
IVEWKPFEIIILLTIFANCVALAVFLPMPEEDTNNTNLTLVRNIIAIRENEKPSPCAQAG
HGRRCTINGTECRAGWPGPNFGITHFDNFGFAMLTVFQCITMESWTDVLYWINDAMGNDW
PWIYFLTLILVGSFFILNLVLGVLSGEFTKEREKSRSRGEYQKLRERQQMDEDLKGYMEW
ITHAEVMDGDSEALLLLRKDTDSETDSLYQMEGINRVIYFYRLARRWNIVLRRKCHVWVK
SKFFNWWVLLVVLLNTLVIAMEHHNQTEGLTSFQDTANVILLACFTIEMVMKMYAFGPRA
YFMSIFNRFDCFVVTIGILEIFLVVSNIMTPLGISVMRCIRLLRLFKLTRYWTSLNNLVA
SLLNSVKSIASLLLLLFLFIVIFALLGMQVFGGKLNFPDRVIQRSNFDNFPQALISVFQV
LTGEEWDSIMYNGIMAHGGPQSPGILVSIYFIILYVCGNFILLNVFLAIAVDNLAEAESL
TAAQKEKAEEKALRKLMRTLPEKSEEEKALMAKRLMESRSKTEGMPTTAKLKIDEFESNV
NEVKDPFPPADFPGDDEEEEPEIPISPRPRPMADLQLKETVVPMPEASSFFIFGPQNKFR
KLCHRIINHTTFTNIILLFILLSSISLAAEDPIDPHSFRNKVLAYADIVFTTVFTIEIVL
KMTVYGAFLHTGSFCRNSFNILDLIVVGVSLLSMGMESSTISVVKILRVLRVLRPLRAIN
RAKGLKHVVQCMFVAIKTIGNIVLVTMLLDFMFACIGVQLFKGKLYYCTDPLQKTAEECQ
GTFLKHVQNSLHDMEVHQRMWVNSDFNFDNVLNGMLALFTISTFEGWPEILYKAIDSNAV
DTGPLYNNRVGISIFFIIYIIIIAFFMMNIFVGFVIVTFQKQGEQEYKNCELDKNQRQCV
QYALKARPLRCYIPKNPHQYRVWYFVTSCYFEYLMFFLIMLNTLCLGIQHCNQSDHITKL
SDTLNLIFTVLFTGEMIVKLIAFKAKGYFGDPWNVFDFVIVVGSIVDVVLSEVDAALDAS
GGLWCLHGCAEVNPMQAIADAENVRVSITFFRLFRVLRLIKLLNRSEGIRNLLWTFIKSF
QALPHVALLIVMLFFIYAVIGMQMFGKIALVDGTEINRNNNFQTFPQAVLLLFRVATGEQ
WPKVMLASMYGKLCDAKSDYVPGEEYTCGSSIAVFYFLSFYMLCAFLVINLFVAVIMDNF
DYLTHDWSILGPHHLDEFKKIWAEYDPEATGRIKHLDVVTLLRRIQPPLGFGKFCPHRSA
CKRLISMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEELRAIIKSIWKRTSMK
LLDQVIPPIGEDEVTVGKFYATFLIQEHFRKFMQRQEEYYGYRPTKKNANEIKAGLRSIE
EEAAPELHRAISGDLIAEDEMERVLEAGEEGIYRRTGGLFGLNTDPFSSEPSSPLSTQVT
SQRPLQFVETRLEDIESPPDSVFLSNTEFFPDNMPTTTNTNNNANFIEDMSSRFTFENES
LSAAATRNYSYEDIRDSSSYVGGVSSVDDRRLSDFTVRTNITQFPCNPSYGPSKNQRAAT
EASLATNKLIQQALRDGGLDSLAEDPQFVSVTRKELAEAINIGVEDMEGMAQGIVNGQSG
KVTKRKRRPIPVPPGTKSTKPKENTSAV
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgggcagtggtggggtggcagctttggcctcgttcatcatgaatgaagaagaa
ctgaaaagaaagcaaagggagaaactcaagaaactacaggccacaggaggaaaccctcga
ccgccacgttccttgttcttcttcacgctcaaaaaccctttccggaagacctgcatcaac
attgtggaatggaaaccctttgaaatcattatcctgctaactatcttcgctaactgtgta
gccctggctgtgtttctgcccatgcctgaagaggacaccaacaacaccaacttaacattg
gtgagaaatatcattgccatcagggagaatgagaagccatcgccctgtgctcaggctgga
cacggacgccgctgcaccatcaatggcactgaatgtcgggcaggttggcctggtcccaac
tttggcatcacccattttgacaactttggctttgccatgctcacagtctttcagtgtatc
acaatggagagctggactgatgttctctactggattaacgatgccatggggaatgactgg
ccctggatctacttcctgactctgatacttgtgggctccttcttcatcctcaacctcgtc
cttggagtattgagcggggagtttactaaggaaagggagaagtcacggtcacgaggagag
taccaaaagctacgagagcgacaacaaatggatgaggatctgaaaggttacatggaatgg
atcactcatgctgaagtgatggatggagattctgaggcacttcttcttcttagaaaggac
actgattcagagacagacagtttataccagatggaggggatcaacagggtgatctatttc
taccgtctcgcacgccgctggaacattgttttacggagaaagtgtcatgtttgggtgaaa
tctaaattcttcaactggtgggttctccttgttgtgttactcaacaccctggtcattgcg
atggagcatcataaccagactgaggggttaacaagttttcaagacactgccaatgtaatt
ctactcgcctgtttcacgattgagatggttatgaagatgtatgcatttggtccgagagcc
tacttcatgtccatcttcaaccgatttgactgttttgtggtcacgatcggaatactggag
atattcttggttgtgtcaaacatcatgacaccactggggatttctgtgatgagatgcata
cgactcttgcgcttattcaagctcacaaggtactggacatcacttaataacttagtggca
tccttactcaactcagtgaaatccatcgcctccctgctcctgctcctcttcctcttcatt
gtcatcttcgccctcctgggtatgcaggtgtttggtgggaaattgaacttccctgacaga
gtgattcagcgcagtaactttgacaacttcccacaggccctcatcagtgttttccaggtc
ctaactggagaggagtgggactccattatgtacaatggaatcatggctcatggcggacct
caatccccaggaattcttgtcagcatttacttcataattctgtatgtctgtggaaacttc
attctcttgaatgttttcttggctatcgctgtggacaatctagccgaggctgagagtctg
acagcagcacagaaagagaaagcagaggagaaggccctaaggaaactcatgagaacattg
ccagagaaaagtgaggaggagaaggccctgatggctaagagactaatggagtccaggtca
aaaactgagggaatgcccaccacagcaaagctcaagatagatgagtttgaatcaaatgtt
aatgaagtgaaagaccccttccctcctgcagactttccaggtgatgatgaggaagaggaa
ccagagatcccgatcagccccagacccagacccatggctgacctacagctgaaggagaca
gtggtgcccatgcctgaggccagctcctttttcatctttggcccacaaaacaagttccgg
aagctttgccacaggatcatcaaccacacgaccttcaccaacatcatcctcctcttcatc
ctcctcagcagtatctccctggctgctgaagaccccatcgacccccattcattccgaaac
aaggtcttggcttatgccgacattgtctttacaactgtcttcaccattgaaattgtgcta
aagatgacggtttatggagcgttcctacatactggctctttctgccgaaactcattcaac
attttggatctcattgttgtgggtgtttccctcttgtccatgggcatggagtcgagtact
atctcagtggtgaagattctcagggtgttgagggtactaagacctctaagggccatcaac
agggccaaagggttaaagcacgtggtccagtgtatgtttgtggccataaagaccattggg
aatatcgtcctggtcaccatgctcttggacttcatgttcgcctgcattggagtgcagctc
ttcaagggcaaattgtactattgtacggacccccttcaaaagacagcggaggagtgtcag
ggaacatttttaaagcatgtgcaaaactctcttcatgacatggaggtccatcagcgcatg
tgggtcaacagtgatttcaactttgacaatgtcctgaacggcatgctggctctcttcacc
atctccacatttgagggctggccagagatcctatataaggctatagactcaaatgcagta
gacacaggccctttgtacaataaccgagtgggcatctccatattctttatcatctacatc
atcatcattgccttcttcatgatgaacatctttgtgggcttcgtcatcgtcactttccaa
aaacaaggagagcaggaatacaagaactgcgagctagacaagaaccagcgtcaatgtgtg
cagtatgcactgaaagcacggcccctcagatgctacatcccgaagaacccgcaccagtac
cgcgtttggtacttcgtgacttcttgctattttgagtacctcatgttctttctcatcatg
ctcaacacactctgtcttggaattcagcactgcaaccagtccgatcatataaccaaactc
tctgacactctcaacctcatcttcactgtcctgttcactggcgagatgatcgtcaaactc
attgcattcaaagcaaagggttactttggagacccttggaatgtgtttgatttcgtcatc
gtggttggtagtattgttgacgtggtcctcagtgaggttgatgctgcgctggatgccagt
ggaggactgtggtgtctacatggttgtgcggaagtgaatccaatgcaggcaatagctgat
gcagaaaatgtcagagtttccatcacgttcttccggctgttccgtgtgctgcgtctcatt
aaactgctgaatcgctcagaggggatcaggaaccttctgtggacctttattaagtccttc
caggcgctgcctcatgtggctcttctcattgtcatgctcttcttcatctatgctgtcata
gggatgcagatgtttggtaaaattgctctggtcgatggtacagagattaaccgcaacaat
aacttccaaacttttcctcaagctgtattgttattgttccgtgttgccactggagagcag
tggcctaaagtcatgctggcctccatgtatgggaagctctgtgatgccaaatcagactac
gtccctggagaggagtatacctgtggctccagcatcgctgtcttctacttcctcagcttt
tacatgctgtgtgcatttttggttatcaatttgtttgtggctgtcattatggacaatttt
gattacctcactcacgattggtcaatcctcggcccgcatcacttggatgagttcaagaag
atctgggcagagtatgaccctgaagcaacgggacgaatcaaacatctggatgtagtaact
ctcctgcggaggattcaaccaccgttgggttttggtaaattttgtccccaccgctcagcg
tgtaagcgcctgatttccatgaacatgccgctgaacagcgacggcacagtgaccttcaac
gccacactcttcgcactggtcagaacagctttgaaaatcaaaacggaaggaaactttgag
caggccaatgaagaactgagagccatcattaagtcaatctggaagaggaccagtatgaag
ctattggaccaggtcattccgcccattggagaggatgaagtcaccgttggaaagttctac
gcaaccttcctgattcaggaacatttccgcaagtttatgcagcggcaggaggaatactac
ggttacaggcctaccaagaagaacgctaatgagattaaggcaggtctgcgtagcattgag
gaggaagcagcacctgagctgcacagggccatctcaggtgacctgatcgctgaggatgag
atggagcgtgtcttggaggccggagaggagggcatctacaggcggacaggaggtctgttt
ggactcaacacagaccccttctcctctgagcccagcagccccctctccacacaggtgacc
agccagaggcccctgcagtttgtggagactcgtctggaggatatagagtcacctccagac
tccgtcttcctctcaaacactgagttcttccctgataacatgccaacaacaaccaacacc
aataacaatgccaactttatagaagatatgtcatccaggtttacgtttgaaaacgagtca
ctgtcagctgctgcaaccagaaactattcatatgaggacataagagactccagttcatat
gtgggcggggtctcaagtgttgatgacagacggctgtcagatttcactgtgaggaccaat
atcacacagttcccctgtaacccctcatatgggccatcaaagaaccagagagcagcaaca
gaagcttcactagccaccaacaaactcattcagcaggcactgagagacggtggtctagac
tccttggctgaggacccacagtttgtatctgtgactaggaaggagctggcagaagccatt
aatattggcgtggaggatatggagggcatggctcagggcatcgtaaacgggcagagtggc
aaggtaacaaaacgtaaacgccgtcccatcccagttccaccaggcaccaagtcaaccaaa
cccaaggaaaacactagtgctgtgtag
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integrated database retrieval system
