Sinocyclocheilus grahami (golden-line barbel): 107552417
Help
Entry
107552417 CDS
T04918
Name
(RefSeq) contactin-1a-like
KO
K06759
contactin 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04514
Cell adhesion molecule (CAM) interaction
sgh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
107552417
04517 IgSF CAM signaling
107552417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sgh04515
]
107552417
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sgh00537
]
107552417
Cell adhesion molecules [BR:
sgh04515
]
Immunoglobulin superfamily
Contactins
107552417
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sgh00537
]
Others
107552417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set_CD47
Ig_5
Fn3_VIN3
Fn3-III_PB4
Motif
Other DBs
NCBI-GeneID:
107552417
NCBI-ProteinID:
XP_016089770
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MIAAAVQHRAMSHTSCCVLLSVSLALSCRLWSVCADFPAVFGDESSGFGPVFEEQPVDTI
YPEESPEDKIIMSCRTRANPPASYRWRLNNTEVVIGNDDHYSLMGGNLIISFPDKSKHAG
NYSCLASNEFGTLVSQKASVQFGYLDMFSSDEREAVYVKEGQGAVLLCAPPPHFPEDLFF
RWILNEFPEFIPLDKRRFVSQTTGNLYISTVRASDSGNYSCFVSSPSIAKSVFSKFIPLV
PIAERSLRKYPADIKVKSPDTYTLLGQNVTLECFALGNPIPQIRWRKVDGDLPVHRHNIS
MAGSLLHLYNIQYEDEGLYECEADNSKGKDRHKMHLYVEGAPEWVEKISSSERDIGGDYI
MSCLASGKPKPHMHFLKNGRMYAKNHELHFTDLTFGDSAMYQCIAENRHGTIYANAELRV
FAGAPSFEWKPVKPKLLGAKNGRVVIDCKPRAAPRPTISWSKGTELLHNSSRIFIWPDGS
LDLLNITKSDEGNYTCFAENDRGRANSSRSLSVTDATKITLAPSNSDVSVGKSARMECAT
SHDPTLDLTFIWSLDAHVIDFDRDREHYEHKTDVNQDGQDGMSSSELLISNTQLRHAGHY
SCTVQTPVDNVTASAELVVRGPPGPPGGVRVDEVMTSSVRVTWSHGTDNLSPISKYSVQY
RDVREQQDWRDASTSPVNVEGNAEMASVINLTPWTEYEFRVIATNTLGIGPPSDPSPKIT
TREARPVVAPSDIGGGGGTSRELTITWTPVQPQYYYASNFGYIIAFKPHKDPEWMRVTVT
DPQAQKYIHKDSKIPPSTRFEVKVKAFNSQGEGPFSVSAFIYSAQDVPAEAPTIIEARTL
SATEAVVSWVPLQLQTVEAYQVRYWRESVENEASAQRVLVPSRENHTRLDNMKPNSHYLI
EVRAYNGAGYGPASQRHKIYTKKAPPSRPPKIIGTKMNYSGTTINIAWEQVEPLTNESTV
EGYKFWIEDEGMLFEEG
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgattgccgcggccgtccagcacagagccatgagccacacgtcctgctgcgtcctgctg
agcgtctcgctcgcgctctcctgccgcctctggtcagtgtgtgctgatttcccagcagtc
tttggagacgagtcgtcaggttttgggcccgtgtttgaggagcagcccgtcgacaccatt
taccctgaagagtctcctgaggacaagatcatcatgagctgcagaacgcgagcgaacccg
ccggcctcgtacaggtggaggctgaacaacacagaagtcgttattggaaatgacgatcac
tacagtctgatgggaggaaacctcatcatcagcttccccgacaagagcaagcatgctggg
aactactcgtgtctggccagcaatgagtttgggacgctcgtcagtcagaaagcctctgtt
cagttcggatacttggacatgttttcctcggacgagcgggaggcggtctatgtgaaggag
gggcagggggcggtgcttctgtgtgctccgcctccacacttcccagaggatctgttcttc
cgctggatactcaacgagtttccggaattcattcctctggacaagcggcgctttgtgtct
cagaccactgggaacctctacatctccaccgtacgagcatcagacagcgggaactactcc
tgtttcgtctccagtccgtccatcgccaagagcgtcttcagcaagttcatcccactggtg
cccatagccgagcgttctctgaggaaatatcccgctgatatcaaagtcaaatctccagac
acgtacacgctgctggggcagaacgtcacactggagtgcttcgcgctgggaaaccccatc
cctcagatccgatggaggaaggtggatggcgatctgccggttcatcgtcataacatcagt
atggcaggaagtctcctccatctgtacaacatccagtacgaggacgagggtttgtacgag
tgcgaggccgacaactccaaaggcaaagacagacacaaaatgcatctgtatgtggaggga
gctcctgaatgggtggagaagatcagtagctcggagagagacatcggaggcgattacatc
atgtcctgtctggccagcgggaaacccaaaccccacatgcacttcctgaagaacggacga
atgtacgccaagaaccatgagttgcatttcacagacctgacatttggtgattcagcgatg
tatcagtgtattgctgagaaccgtcacggcacaatatatgccaacgccgagctcagggtc
tttgccggcgctccttcgtttgagtggaaacccgtgaaacccaaacttctgggggccaaa
aacgggcgcgtggtgattgactgcaaacccagagcagcgccgcggccgaccatctcctgg
agcaaaggaactgaactcctacacaactccagcaggattttcatatggccagacgggagt
ttagatcttctgaacatcactaaatcagacgaaggaaattacacatgtttcgcagaaaat
gacagaggccgagcgaacagctccagatcgctgtcagtcactgacgccacgaagatcact
ctggccccgtccaactctgacgtcagtgtgggaaagagcgccaggatggagtgcgccacg
tcacatgaccccaccctcgacctcaccttcatctggtccctcgatgcacacgtcattgac
ttcgaccgagatagagagcattacgagcacaaaacggatgttaatcaggatggtcaggat
gggatgtccagctcagagctgttgatcagtaacacccagctgagacacgcaggacattac
agctgtacggtgcagacgccggtggacaacgtcacggcctccgcagagctggtggtcaga
ggtcccccaggtcctcccggtggtgtgcgtgtggacgaggtgatgaccagcagcgtgagg
gtgacctggagtcacgggacggataacttgagtcccatctccaaatacagtgtccagtac
agagacgtgcgagagcagcaggactggagagacgcctccacctctccagtgaatgtggag
ggaaatgcagaaatggcctccgtgatcaatctgacgccctggacggagtatgagttcagg
gtcatcgccaccaacacgctgggcatcggacccccgagtgacccctcgcccaaaatcacc
accagagaagccaggcctgttgtggctccgtcagacatcggtggaggaggaggaaccagc
cgtgagctcaccatcacatggacgccagtccagccacagtactactacgccagtaatttt
ggctacatcatcgcattcaagcctcataaagaccccgagtggatgagggtgacagtgacc
gatcctcaggcccaaaagtacatccacaaagactcgaaaatccccccgtccaccaggttt
gaggtgaaggtgaaggcctttaacagtcagggtgaagggccgttcagcgtcagcgccttc
atctactctgctcaggatgttcctgcggaagctcccaccatcatcgaggcgaggacgctg
tcagccacagaagccgtcgtgtcctgggtgcctctacagctgcagacggttgaagcatac
caggtccggtactggagggagtcggtggagaacgaggcatctgcacaacgtgttctggtt
cccagtcgagaaaaccacacgcgtctggacaacatgaagcccaactcacattacctcatc
gaggtgcgggcgtataacggcgccggctacggacccgccagccagcgccacaaaatctac
accaagaaagcacctcctagtcggcctcctaaaatcatcggcacaaagatgaactacagc
ggcacgacgatcaacatcgcctgggagcaggtggagccgctgaccaacgagtcgacagtg
gagggatataagttctggatcgaggacgaaggaatgctgtttgaagaagggtga
DBGET
integrated database retrieval system
