Sinocyclocheilus grahami (golden-line barbel): 107555487
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Entry
107555487 CDS
T04918
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107555487 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107555487 (ttc37)
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
107555487 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_11
TPR_14
TPR_16
TPR_17
TPR_8
TPR_12
TPR_CcmH_CycH
TPR_9
ANAPC3
HAT_Syf1_CNRKL1_N
Fis1_TPR_C
TPR_MalT
TPR_15
TPR-S
ARM_TT21_C
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
107555487
NCBI-ProteinID:
XP_016093788
LinkDB
All DBs
Position
Unknown
AA seq
1587 aa
AA seq
DB search
MRFCVLLNGNKRSSAKMSSKEVKAGLKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWV
FIGVAATELQQPDQAQTAYRKATELEPEQLLAWQGLANLYEKSDQADFKAELPKIYQKLI
TLYEISDKAKYFEVSKKLVEVYQLEKNYLQVARVWRRLIQVREREAEEGLEDSELLELWK
EMTRLLQDTVEDQDNETQQHLILAFERALQMMVDVPSEVHKSLSQDYIKCLSKLPHEVAK
LKEVCDATLSRYPTHPYPLEALSENYIRTDDCNEEAVCCFSRLSELDPNNSQAHFGLGIK
ACQDKKYEDAIKSISLGLKRMRSSIIGWYNLALAQLKMHKYSDSATASSQGLKSSVGNSD
DWTHKLQKLKLEALVRTGREQDADEALQILTQISDAKNDPVLLALKGRAHLQKGQTEEAF
QVSAELLSSHPGSVEGLTLKGLAHVAKEQHKQAEESFLEALSRSPDNGELFFLLGRLYWS
MGDEMRRDRNKAHTHLLKAAKLDPYLGSVFRFLGHYYKEVAKDQGRARGCYKRAFELDSS
DAEAGAATVDLSMEQGDMDSALTVLQSVTERATPGSAKWAWMRRGLYHLKTGQHQQAIAD
LQAALRADPLDWVCWECLGEAYLNRRSFIAALKAFDKAHALQPTSIYSLYQTAAIKQILG
RFKEAAAEYRQISEQEDYVPALKGLGECLLALARNALDDYLDGRAVDLIQNAIHYLFRAV
KQRPDLSCLWKLLGDACTTSRTVSPNRAKVLVPGALCGMDPPDQSHTLDQRQLLTLGERC
FGRALKLMPEAPRLWCDLGLNYYHQSRLLNCLYPEDDAQSLLEKAMQCVKKAIKLDSANH
TYWNTLGVVAMAKGIENFALAQHCFIKSVKAESNNVVAWTNLGALYLKKGNIELSHEALK
IAQSLEPLYVNCWIGQAIIAETVGSFDTMDLFRHTTELSTHTEGVKGYAYWVCSTLLDKS
NRDSELYLYNIVQMNAISAAQVALSKYTERIQTDPDAFIMLGYLNTHLQLKKQATEAYRR
AVELLQASPHTDQLSFALRGYGRALSDDGQWEEAVRVYSSTPLEELHDLIGLALACFRIG
RLPESVQSYEKALVVASSEKEKACILTALALIQHRLGSMDHAKTLLFKCSMLKEPVPESL
QCLCALGLVHGDVTLASATLTELLKLGEPIGGAVEERCLLTCTLLALQGNFSGVHREAAR
AIHRNPGNPSLWALLSRLVPQYCPNKANGGAVAGSVACHASLTLGKRALLYSGVNQLASG
RHSGEDRRRNALKTIQRAVLLCPEDPAGWAGLMAACHTENTACLLTGSAPRREDLERAHM
TLVSEKVKSLQAEDGLLAQALEGWVLQQAVTGLKQSSQYDQAETLCSQVLSVSPEHPVVF
LMLRQVQCERLLLSEASNCVPPAVLDQLSAAVMANHTSVSAWHWLAEVYRSQGLLAQASV
AYRKSLQLASQLGDHFGKMSSLLRLALLALMPCLQAGVCVSEWKDLVLEASAEVLKMGSS
PVALLYQALLQFSIKMGARETRRLLEKIVYASASGSSETIASVARWYLLRHLHTKDDLEL
IDTLLVKATAEGDSRLVDFHRRLYPSS
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttttgcgtcttgctgaatggaaacaaacgaagttctgccaaaatgtccagtaaa
gaagtaaaagctggactaaaaagtgctagagaagccatcaagaataaagagttcaaagaa
gctttgaaacattgtaaggctgttctcaaacttgagaagaataactataatgcttgggtg
tttattggagtggcagctacagagctgcagcagccggatcaggctcagaccgcctacaga
aaggccactgaactggagccagagcaactgcttgcatggcagggtttagcaaatctgtac
gaaaaaagtgaccaagcagatttcaaagctgagctgccaaagatttaccagaaacttatt
acattgtatgaaatctcagacaaagctaaatattttgaagtgagcaagaagttggtggag
gtctatcagttggagaagaactatttacaggtggccagagtgtggaggaggttaatccag
gtgagggagagggaggcagaggaagggctggaggattcggagctgctggagctgtggaag
gagatgaccagactcctgcaggacactgttgaggatcaggacaatgagactcagcagcac
ctgatattagcatttgaaagagctttgcaaatgatggtggatgtgcccagtgaagtccac
aagagcctttcacaggattacattaaatgtctttctaagcttcctcatgaggtggccaag
ctaaaggaagtttgtgatgccacactgtcccgctatccaacacacccctaccctctagag
gctctgagcgagaactacatcagaacagatgattgcaatgaggaagctgtctgctgtttc
agccgtctatcagaactggatccaaacaactcgcaagctcactttggtctcggtattaaa
gcttgtcaggataaaaaatatgaggatgccatcaaaagtattagtctaggactgaagcgt
atgcgctcctccatcattggctggtataatcttgctctggctcaactaaaaatgcataaa
tactctgacagtgccacagcttccagccaagggctaaagtcgagtgtggggaactctgat
gattggactcataagctgcagaagttgaaactagaggctctggtgaggacaggaagagag
caggatgctgatgaagctctgcagatccttacacagatttcagatgccaaaaatgaccca
gtgcttttagcgttgaaaggaagggctcacttgcaaaagggccaaactgaggaagcattt
caggtttcagctgagcttctgagctctcacccaggatctgtggagggtctcactctgaaa
ggactggcacatgttgctaaagaacagcacaaacaagctgaagagagctttctggaggct
ttatccagaagcccagataatggggagttgttcttcctgctggggcgcctgtactggagc
atgggagatgaaatgcgaagggaccgcaacaaagcccatacacatttactcaaggctgct
aaactggacccgtatcttggttcagtgtttcgtttcctgggtcattactataaagaggta
gcaaaagatcagggcagagccagaggctgctataagagagcgtttgagctggattcctct
gatgcggaggccggagcggccactgtagacctcagcatggagcagggggacatggactca
gctctgactgttctgcagtccgtaaccgagagagccactccgggctctgctaaatgggcc
tggatgaggagaggtctctaccacctcaagactggccagcatcaacaggccatcgcagat
ctgcaggcggcgttgagggctgatcctctggactgggtgtgctgggaatgtttaggtgag
gcttacctgaaccgcaggagtttcattgctgccctgaaagctttcgataaagcacatgca
ctgcagcccacttccatctacagcctctatcagaccgccgccatcaaacagatcctcggc
cggtttaaagaggccgctgcagagtacaggcagatctcagagcaggaggactacgtgccg
gcactgaaaggtctgggtgaatgcttgctagccttggctagaaatgcactggatgactat
cttgatggaagagctgtagatttgatccagaacgccattcattacctcttcagagctgta
aagcaaaggccagacctgtcgtgtctgtggaagttactaggggatgcctgcaccacctcc
agaactgtgtccccaaaccgagccaaagtgctggtgcctggagctctatgtgggatggat
ccacctgatcagagccatacattggaccagagacagctcctcactctaggagaaaggtgc
tttggtcgtgctttgaaactgatgccagaggccccccgtctgtggtgtgacctcggcctt
aactactaccaccaatccagactgctcaactgcctgtatcctgaggacgatgcacagtct
ctgctggagaaagccatgcagtgtgtgaagaaggcaatcaagcttgacagtgcaaatcac
acatattggaacacccttggggtggtcgccatggcaaagggaatagaaaactttgcactt
gcacaacactgcttcatcaaatccgtaaaagccgagtcaaataatgtggttgcgtggacc
aaccttggtgctttgtatctgaagaagggaaatatagagctctctcatgaagctttaaag
attgctcagtctctagagcctctctatgtgaactgctggatcggacaggccatcattgct
gagacagtgggcagttttgacaccatggatcttttcagacacaccacagaactgagcaca
catacggagggagtgaagggttatgcatactgggtttgctccacactgctggacaagagc
aacagagactctgagctctacctctacaacatagtccagatgaatgccatctctgcagcc
caggtggctctgagcaagtacactgagaggattcagacagacccagacgccttcatcatg
ctcggatacctgaacacacacctgcagctgaagaaacaggccaccgaggcatatcgcaga
gctgttgagttgcttcaggcatcccctcacacagaccagctcagctttgctctgaggggt
tatggacgtgccctcagtgatgatggacagtgggaagaagcagtgcgtgtttattcctcc
acaccactagaggagctccatgatctcatcgggcttgcgctcgcttgtttcagaatcggt
cgtctgccagagagcgttcagagctatgagaaagcccttgtagttgcctctagcgagaag
gaaaaagcctgtatactcactgcacttgccctgatacagcacaggctgggcagcatggat
catgccaaaacgcttctcttcaagtgctccatgctgaaagagccagtaccagagagtctg
cagtgtctgtgtgctctgggtttggttcatggtgatgttaccctggcaagtgctacgctt
actgagctgctaaaactgggggaacctataggaggcgccgtggaggagcgctgtctgctc
acttgcaccctgctggccctgcagggcaactttagcggtgtacacagggaggctgctagg
gctatacacaggaacccaggaaatccatctctctgggctcttctctccagactggtccca
cagtactgccccaacaaagccaatggaggtgctgtggccggcagtgtggcatgtcatgcc
agcttgacacttggaaagagggcgttgctgtacagtggagtgaatcaactggcttcaggc
cggcactctggtgaggacagaagacgcaatgctctgaaaacaatccagagagctgtactg
ctgtgtccagaagatcctgctgggtgggcagggctaatggccgcctgtcacacagagaac
actgcatgcttactcacaggctccgcccctcgcagagaagatctggagagggcgcacatg
accctggtgtctgaaaaagtgaagagcctgcaggcagaggacgggctcttggctcaggcc
ctggagggatgggtgctgcaacaagctgtgactggactcaaacagagcagccaatatgac
caggcagagactctctgctcccaggttctgagtgtttctccagagcatcctgtggtgttc
ttgatgttaaggcaggttcagtgtgagcgcctcctgttgtctgaagccagtaactgtgtt
cctcctgcggtgctggatcagctcagtgctgcggtcatggccaaccacacatctgtgtcc
gcctggcattggttggcagaagtgtaccgctctcagggtctgctggctcaggcctctgtg
gcatatagaaagagtcttcagttggcctctcagctcggtgaccactttgggaagatgagc
agcctgctccgactagccctgctagcgctcatgccatgtttgcaggctggtgtctgtgtc
tctgagtggaaggatctggtgttggaggccagtgctgaagtcttaaagatgggcagctca
ccagtagctctgctctaccaagccttactgcagttctctataaagatgggtgccagggaa
acccgtcgcctgttggagaagattgtttatgcttcagcctcagggagctctgaaacaata
gcgtcagtggcacgttggtacctcctgcgccacctgcacaccaaagatgacctggagctg
atagataccctgttggtgaaggctacagcagaaggagacagcagactggtggatttccac
agacgcctttacccatccagctga
DBGET
integrated database retrieval system
