Sinocyclocheilus grahami (golden-line barbel): 107558603
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Entry
107558603 CDS
T04918
Name
(RefSeq) sodium channel protein type 1 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107558603
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107558603
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
Neur_chan_memb
IQ
Motif
Other DBs
NCBI-GeneID:
107558603
NCBI-ProteinID:
XP_016097751
LinkDB
All DBs
Position
Unknown
AA seq
1884 aa
AA seq
DB search
MAHSFTPPGPKSFRKFTRESLEAIESRIAEENARKSKDKQERNKDDECRRKPNSGLAVGK
NLPFIYGDVPRGLVSTPLEDLDQFYSSQATFIVVNKKKTISRFNAAPALYIFSPFNLLRR
ISVKILVHSLFSMFIMFTILANCAFMVYSQPPDWAKNVEYTFTGIYTFEALIKIIARGFC
VGQFTFLRDPWNWLDFMVIVMAYVTEFEDLGSVSVLRAFRVLRALKTISVIPGNHYIQSG
KKDAMICGKSSDAGQCPENHVCIKAGPNPDYGYTSFDSFGWAFLALFRLMTQDYWENLYQ
QTLRAAGKTYMIFFMLVIFLGSFYLVNLILAVVALAYDEQNQATIDEALKKEEEFNAMLQ
QLMRQEEEAQAAAEASKCDGLSGEKTDSSSDASKLSSKSAKERRNRRKKKQRQGEGEKEE
DSNREGTDRKVSFRFPADGKIRRSRERTYTSPHQSPLSFQGSVLTPRRDSKGSIFSFRGR
VHSENNYADDERSMCEETGSRRNSLFVPSRSDPLYSTLSKSSLTPRILLPSNGKARYVVD
SNGMVIVSGGASSPNSPSGLLAPEVSRKRATFDDTCFDTDEEYRRRCDSRRFSRAFLYDQ
SARQRALSVASVSNIDPSEVWKQKCVDYWFEFAESYLIWDCSPTWLKIKKIVHMVMMDPF
ADLFITICIVINTTFMAMEYHPMEAPYINMLSTANVVFIAIFTAEMIFKIIALDPYTYFQ
EGWNIFDSIIVTLNLLELCFPKISFLRPFRLLRVFKLAKSWPTLNMLIKIIGNSLGALSN
LTLVLAIIVFIFAVVGMQLFGKNYRDCVCKISEDCTLPRWHMNDFFHSFLIIFRVLCGEW
IETMWDCMQVSEQALCLIVYMMVMVIGNLVVLNLFLALLLSSFSADNLAVPGEDVEKNNL
QIAVGRIKKGFALVKACLQNFFRSGCIRKRKPKKKTVDGNMILRNCKAINDNSNHTSLEL
VKGTSGTDMDSDTEDFISNPSLTVSVPIAVEESDFECLNTEDFCSLSSDLEDKEKLSDVA
PSSSEGSTVDLRHFVKKDGEDSLDSELEESTDPEACFTTGCVQQFPCCQVDAEKGMWKKW
WLLRQTCYNIVEHSWFETFIVFMILLSSGALALEDIYLDSRKTIKTILEFADKVFTYIFI
LEMLLKWVAYGFVKYFTNLWCWLDFIIVDVSLISLVANALCYSELGAIKSLRTLRAFRPL
RALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIVGVNYFAGKFYECVNQTSGKR
MSIADIGNKTDCLNSPNDLVWRNVKINFDNVGNGYLALLQVATFKGWMPIMHAAVDSRSV
NVQPKYEDSLYMYLYFVIFIILGAFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKY
YNAMKKLGSKKPQKPIPRPKNKIQGFIFDLVTNQAFDIFIMVLIWLNMVTMMVETDDQSK
EMGKVLQWANVGFIVLFTSECVLKMAALRQYFFTVSWNVFDFIVVILSIAGMFLAQVIKK
YFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIF
GMSNFAYVKKSGGIDDMFNFETFGNSMLCLFQITTSAGWDGLLAPMLNTNESECNPNKTF
PGSQVKGDCGNPPIGIFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFNR
FYEVWEKFDPKATQFMDYDKLSDFANSLDPPLRIPKPNRLQLISMDLPMVSGERIHCLDI
LFEFTKRVLGEGGEMDILHRQMEDRFMAANPSKSSYEPITTTLRRKHEDMSAAIIQRAYR
NHIVRHSMKKIRNVYRKTRQQNGKVPSKESVDNEMCEDDSALENSDATPATSSPLSYDSL
TQNATNKYKKDKHEKEVEDKGNGV
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atggcgcattcgtttactccaccaggacctaaaagtttccgtaagttcacccgtgaatca
cttgaggccatcgagagccggatcgctgaggagaatgccaggaagtccaaggacaagcag
gagagaaataaagacgatgaatgcagaagaaaacccaacagcggcctggcggttgggaaa
aatctgcccttcatatacggagacgttcccagaggactggtgtccacaccactggaggac
ctggaccagttctacagcagtcaggcaacttttatagtagtgaacaaaaaaaagacaatc
agccgtttcaacgctgctcctgccttgtatatcttcagtcccttcaaccttctgagaaga
atatcagttaagattttggtgcattcattgttcagtatgtttataatgttcactatactg
gcaaactgcgctttcatggtctactcacagcctccagactgggccaagaatgtagagtat
accttcactgggatatacacttttgaagcacttataaagatcatcgccaggggattctgt
gtgggacagtttacgtttctcagagatccgtggaactggttggattttatggttatagtc
atggcatatgtaacagagtttgaggatctgggtagtgtgtctgtgctgcgagcgttcaga
gttcttcgagccctgaaaactatatcggtcatcccaggtaatcattatatccaatcagga
aagaaagatgctatgatctgtgggaaaagcagtgatgctgggcagtgtccagaaaaccat
gtctgtataaaagcaggtcccaatccagattatggttacacaagctttgattcctttggc
tgggccttccttgccttattcagactgatgactcaagactactgggagaatctttaccaa
cagactcttcgggctgcaggaaaaacctacatgatttttttcatgctggtcattttcttg
ggatccttctacctggtgaatctgatcctggctgtggttgccttggcatatgatgaacaa
aatcaagccactattgatgaggctttgaagaaagaggaggagtttaatgccatgctccag
cagctgatgagacaggaagaggaagctcaggctgcagctgaagcatccaagtgtgatggg
ctgagtggagaaaagacagactcttcctcggatgcctccaaactcagttccaaaagtgcc
aaagaaagacgcaaccgcaggaaaaagaaacagcgtcagggggaaggcgagaaagaggag
gattccaacagggagggaactgatagaaaggtcagcttccgttttccagctgatggaaaa
atccggcgctcacgtgaaaggacttacacgtctccacatcagtcccccctgagttttcag
ggctcagtcctcaccccacgtcgggacagcaaaggaagcatcttcagcttccgcgggcgt
gtgcattcagaaaacaactacgctgacgacgagcgaagcatgtgtgaggagacgggcagc
aggagaaactctttgtttgtaccctctcgatccgatccgctttacagcactcttagcaaa
agcagtctgactccacgtatactgttgccgtctaatggaaaagcacgatacgtggtcgac
agcaatggcatggtgatagtgtcgggtggagcgtcttcacccaactcgccctccggacta
ctggcaccggaggtgtcaagaaaaagagccacgtttgacgacacttgctttgacacagat
gaagaatatagacgccgatgtgattcaaggagattttcaagggcttttctatatgaccaa
tcagcgagacagcgagctttgagcgtagcaagtgtcagcaatattgacccgtcggaggtc
tggaaacagaagtgtgtggactactggttcgagtttgcagagagttatctgatctgggat
tgcagtcccacatggctgaagataaagaaaattgtccacatggttatgatggaccccttt
gcagacctgtttatcaccatttgcatcgtgataaacacaacattcatggccatggagtat
caccccatggaggccccctatattaacatgctttcaactgccaatgtggttttcatagcc
atctttacagcagaaatgatattcaagatcattgcgttggacccgtacacttactttcag
gaaggctggaatatcttcgacagcatcatagttacgctgaatcttctggaactttgtttt
cctaaaatcagttttcttaggccattcagactgctgagagtcttcaaactagctaagtcc
tggcccactctgaacatgctcatcaagatcattggcaactcgcttggcgccttgagcaac
ctgacgcttgtgctggccatcatcgtcttcatcttcgctgtggtgggcatgcaactgttc
gggaagaactacagagactgtgtatgtaagatttcggaggattgcacgcttcctcgctgg
cacatgaacgatttcttccattcgttcctgatcatcttcagggtgctgtgcggagagtgg
atcgagaccatgtgggactgcatgcaagtgtcggaacaggccttgtgcttaattgtgtac
atgatggtcatggtgattggaaatctggtggttttgaacctgttcctcgctctgctgctc
agctcattcagtgccgacaacctcgcggtccccggagaagatgttgaaaagaacaacctg
cagatagcggttggtcgaatcaagaaaggttttgctctagttaaggcctgccttcagaat
ttcttccggagtggctgtataagaaagaggaagccgaaaaagaaaaccgtagatgggaac
atgattttgaggaactgcaaggcaataaatgataactccaatcacacctcactagagctg
gttaaaggcaccagcggtacagacatggatagtgacacagaggattttatcagcaaccca
agcttgaccgtcagtgtcccgatcgctgtcgaggagtcagactttgagtgcctcaacact
gaggatttctgtagcctttcttcagacctagaggataaagagaagctgtctgacgtggct
cccagctcttcggagggcagcacggtggacctcagacacttcgttaaaaaagatggagaa
gattctttggactctgaacttgaggaatctactgatccagaagcctgtttcacaacaggg
tgtgtccaacagttcccgtgctgccaggtggatgctgaaaagggcatgtggaagaaatgg
tggctgctgagacagacatgctataacatagtggagcacagctggtttgagaccttcatc
gtcttcatgattctgcttagcagtggcgctctggcacttgaggacatttaccttgactca
aggaaaaccataaagaccatactggaatttgctgataaagttttcacctacatcttcatt
ctcgagatgctgctgaaatgggtcgcgtatggttttgtcaaatacttcaccaatctctgg
tgctggctggattttattattgttgatgtctctctgatcagcctggtggccaacgccctg
tgttattcagagctgggcgccatcaaatctctccgaaccctgagagccttccgaccactc
cgagctctctcacgctttgagggaatgagggtggttgtgaatgctcttctgggcgccatc
ccctccatcatgaacgtcctgctggtctgcctcatcttctggctcatttttagcattgtg
ggcgtcaactacttcgccggaaagttttacgaatgtgtaaaccaaacctcgggaaagcgc
atgtctatcgcagatatcggtaataaaacggattgtctcaacagccccaatgacctcgtc
tggagaaatgtgaagattaactttgacaatgtaggaaatggatacctggccctgctacaa
gtggccacttttaaagggtggatgcccattatgcatgcagcggtagactctcgcagtgta
aatgttcaaccaaagtatgaggactctctgtatatgtacctctattttgtcatcttcatc
atccttggagcttttttcacattaaatctcttcattggcgtcatcattgacaacttcaat
cagcagaagaaaaagtttgggggtcaggatattttcatgacagaagagcagaagaaatac
tacaacgctatgaagaagctcggctcaaagaaacctcaaaaacccattccaaggccaaaa
aacaagattcaaggattcatctttgacctcgtaaccaaccaggcctttgacattttcatt
atggtccttatctggctcaatatggtcactatgatggtggagacggatgatcaatctaag
gaaatgggcaaagtgctgcagtgggccaatgttggtttcattgtgctcttcaccagcgaa
tgtgtgctaaagatggctgcgctacggcagtacttcttcaccgtcagctggaatgtattc
gactttatcgtggtcatcctgtctatagctggcatgttcctggcacaagtcattaagaag
tactttgtctcgcccaccttgtttcgcgtcattcgcctcgcccggatcggccgcgtgcta
cgtcttatccgaggcgccaagggaatacggacccttctgtttgcgttgatgatgtcactt
cctgcccttttcaacatcggacttcttctcttccttgtcatgttcatctacgccatcttc
ggcatgtccaacttcgcctacgtcaaaaaatcgggcggcatcgacgacatgttcaacttc
gagacgtttggcaacagcatgttgtgtttgtttcagatcaccacctcggcaggctgggac
ggccttctggcacccatgttaaataccaatgaatccgaatgcaacccgaataaaaccttc
cctggcagccaggttaaaggcgactgcgggaacccgcccatcgggattttcttcttcgtc
agctacattatcatatgcttcctgatcgtggtgaacatgtacatcgccgtcatcctggag
aacttcagcgtggccaccgaggagagcgccgagcctttgagcgaagatgacttcaatagg
ttttacgaggtttgggagaagtttgacccgaaagccacgcagttcatggattacgacaag
ttgtcagacttcgccaattctctggatccgcctctgcgaatccccaagcccaaccgactg
cagctgatctccatggatctgccgatggtgagcggcgaacgcatccactgtctggatatc
ttgttcgaattcaccaaacgggttctcggggaaggtggcgagatggacatccttcacaga
caaatggaagaccgattcatggccgccaacccctcaaagtcctcttatgagcccatcacc
acaaccctgcgcaggaagcatgaagatatgtctgctgcgatcatccagagagcctatagg
aaccacatagtccgacatagtatgaagaagatccgtaatgtgtacagaaagaccaggcag
caaaacgggaaggtcccgagtaaagaatctgttgacaatgaaatgtgcgaggatgacagc
gctttggaaaactctgatgcaacgcccgccacgtcctctccgctgtcgtatgatagcctg
acgcagaacgccacaaacaaatacaagaaggacaaacatgagaaggaagtggaagacaaa
ggaaacggcgtttag
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integrated database retrieval system
