Sinocyclocheilus grahami (golden-line barbel): 107559712
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Entry
107559712 CDS
T04918
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107559712 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107559712 (exosc7)
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107559712 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
107559712 (exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DDE_Tnp_4
Motif
Other DBs
NCBI-GeneID:
107559712
NCBI-ProteinID:
XP_016099107
UniProt:
A0A672KI02
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MAAVQVSEAEKVYVMHGVRDDLRLDGRGCEDYRHMEIETDVVSNTDGSAKISLGHTDVLV
GVKAEIGKPKAMVPDEGYLEFFVDCSANATPEFEGRGGEELGVELSNTLCKVFNNRHSMD
LRSLCICPGENCWVLYVDVLLLQCDGNLFDAISIAIKAALFNTRIPKVHISEDEEGVKEI
ELSDDPYDCMRLNVKNVPCIVTLCKIGHRHVVDATLQEKACSVASLLISVTHRGTVTCVR
KMGGGSLDPESIFEMTEAGKRVGKALHVPLMELLQKEESLGKKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagttcaagtaagcgaagcggagaaggtttatgttatgcatggagttcgagat
gacctgagattggacggacgaggatgtgaagactacagacacatggagatcgagacggat
gtggtgtcaaacactgatggttctgctaaaatcagtcttggtcacacagatgtgcttgta
ggagtaaaggcagagattggtaaacccaaagccatggtgccagatgaaggttatctggag
ttctttgtggactgctcagcaaacgccactccagagtttgaggggcgtggaggggaggag
ctgggggtggagcttagtaacacactctgtaaagtgttcaacaacagacacagcatggac
ctgcgttctctctgcatctgcccgggagagaactgctgggtgctgtatgtggacgtgttg
cttctgcagtgtgacggaaacctgtttgatgccatatccatcgcaataaaagctgctctg
tttaatacacgaatccccaaagtgcacatatctgaggatgaggagggtgtgaaggagatc
gagctgtcagacgacccttacgactgcatgcggctcaatgtgaaaaatgtgccatgtatc
gtaaccctctgcaagattggtcacagacacgtggtggacgctacactacaggaaaaggcc
tgttctgtggccagtctcctgatttcagtcacgcacagaggaacggtcacatgtgtcagg
aaaatgggaggaggaagtctagatccagagagtatctttgaaatgacagaggctggtaag
cgtgtgggaaaggctcttcatgtgcctctcatggagctgctgcagaaagaagaaagtctg
ggcaagaaacggcagaaagtgggattcctcggatag
DBGET
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