Sinocyclocheilus grahami (golden-line barbel): 107560234
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Entry
107560234 CDS
T04918
Name
(RefSeq) whirlin-like isoform X1
KO
K21879
whirlin
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sgh03037
]
107560234
Cilium and associated proteins [BR:
sgh03037
]
Primary cilia and associated proteins
USH complex and associated proteins
107560234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
USH1C_N
DUF6288
Motif
Other DBs
NCBI-GeneID:
107560234
NCBI-ProteinID:
XP_016099841
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MSTDLERASLKSGSNSLGSGGRALSVNVKKLHNTLNVLLNDFEREQFIHCLNVYHAKRNV
FDLVQTLKVILNTANKRQLLPMLRLVIPRSDQLLFDQYTSEGLYLKTDLLAASVTHECSE
DLSSTNAHAGASSVHFLHESEQAGPSHGSVRQALVFSTAAEGTAPAPMQEAPDEIRQVTL
KRSKSHEGLGFSIRGGSEHGVGIYVSLVEPGSSAEREGLRVGDQIVQVNNMVFDRVTHGE
AVKVLKGSKKLSMSVCSMGRIPGGYVTNHVYTWVDPQGRSVSPPPDLLEQHGSGGRHSDI
QQHGHTHIRHEGAEKKVNISLDDGRSLGLMIRGGAEYALGIYITGVDRGSAAEYSGLKVG
DQILEVNGRSFRSISHDEAVQILKNSRHMLMTIKDVGRLPHARTVVDETKWIPSAQIAES
SANSNALSVLPVDVGAGSSGKSICCKGVVPAVGAVRAGAWSSLEEQAYMLLTETERQTMS
YYIQEYLRAHIGVEPLAMALFELFNTHAKLSLLAEVRTLIAPQDLERFDKQVLHREMEAW
RARHRGPGLLHPDSICVTHSEGHIPAACQLTTAVPGYNKNECRLDGSLMPLESLDSLPDV
SLDKVQPPSESPPSFKPPPPPVRHASPKNQTKRPSSKLSQTNLLFTAPCRRHQENHTHNH
SHSPCSAHTSPCTIHHTASTCSVRHTPPPCSHHHSSPRSLSYHASPSSGPPCKDLVQFLM
SRQAAVLSPHLESPNRSREGTPMISPRSSPSISPSLLMPAPPPCSPEKLEDSPSTHSCVA
AQTSPLHPEPETTEERPQPQLRGATLSQLSDSGQTLSEDSGVDIAEAGGLSKDSSPRPGK
PPFLQVTGDTRRAEGLAQASAKQMRGTEPTLVRVPKCASTLGIAVEGGANTRQPLPRIAT
IQMISLCGKFETAACFSLLLSVSQKGGCVHISGQFRVGQVILEVNGVSLKGMEHRDATRV
IAEAFKTKDKDYVDFLIAEFNSAL
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggatctggagcgcgcttctctcaagtcgggctcgaactccctgggctccggt
ggccgcgcgctttccgttaacgtcaagaagttgcacaacacgctcaacgtgctgctcaac
gacttcgaaagggagcagttcatccactgtctcaacgtttaccacgccaaacgcaatgtc
tttgatctcgtgcagactctcaaagtcattctcaacacagccaacaagcgccaactctta
cccatgctgcgcctggtcataccccgctcggaccagctgctgttcgaccagtacacatcg
gaagggctttatctgaagacggatctgctggcggccagtgtcacgcacgagtgctcggaa
gacctcagcagcacgaacgcgcatgctggagcatcctccgtgcactttctgcacgagtcc
gagcaggccggtcccagtcacggatccgtgcgccaggctctggttttcagcaccgcggct
gaggggacagcgccagcgccgatgcaggaagcgcctgatgaaatccgccaagttacgctg
aaaaggagcaagagccacgaaggcctgggattcagcatacggggtgggtcagagcatgga
gttggcatctatgtgtctttggtggagccgggatcatccgctgagagagaggggctcaga
gttggagaccagatcgtgcaagtcaataacatggtgtttgaccgagtcactcatggagag
gcagtaaaggtattgaaaggctctaagaagctctccatgtcggtctgttctatgggacgg
atcccaggtggttacgtgaccaatcatgtgtacacatgggtggaccctcagggccgcagt
gtgtccccaccaccagacttgctggagcagcatggctcaggaggaagacactcggacatt
cagcaacatggccacacacacattcggcacgagggtgctgagaagaaggtgaatatctca
ctggatgatgggcgatctctgggtttgatgatccgtggaggtgctgagtatgctctgggc
atttatatcaccggagtggaccgagggtctgctgcagagtacagcggactaaaggtaggg
gatcagattctggaggtcaatggacgtagcttccggagcatttctcacgacgaggccgtg
cagatcttgaagaattcccgccacatgctgatgaccataaaagacgtggggcggctgcct
cacgcacggactgtggtggatgagaccaaatggattcccagtgcacagatcgctgagagc
tcggccaatagcaacgccctgagtgttctgcctgttgatgttggagcaggaagttcagga
aagtcaatctgttgtaaaggtgttgtgccagcggtcggagcggtacgcgcaggagcctgg
agctcactggaggagcaggcgtacatgcttctgacagagacagagagacagaccatgagc
tattacattcaagagtacctgcgcgcacacatcggtgtagagcctctggccatggccctg
tttgaactcttcaacacacatgccaagctgtccttgctggctgaggtgcggactctgatc
gccccgcaggatctggagcgattcgacaagcaggtgttacatcgcgagatggaagcgtgg
agagctcggcacagaggcccgggcctcctgcaccctgactctatctgcgtcacccattca
gagggccacattcctgctgcctgccagctgaccactgcagtccccggctacaacaagaat
gagtgcaggctggatgggagtttgatgccacttgagagtcttgattctcttcctgatgtt
tctctggacaaggtgcagccgccatccgagtcacccccctcgttcaagcctccccctcca
cctgttcgacacgccagccctaaaaatcagaccaaacgaccttcgtccaagctgtcccag
accaatctgctctttactgccccctgtaggcggcatcaggaaaaccacacccacaatcac
tcgcattcgccctgctctgctcacacctccccatgtaccatccaccacaccgcctccacc
tgctctgtccgtcacactcctccaccctgctctcaccatcacagctctccacgatcatta
tcataccacgctagcccttcttctggacccccatgtaaagatttggttcagtttctgatg
agcaggcaggcggcagtgctctccccacacctagagtctccaaatcgttctagagaggga
acccccatgatctctccacgctcctctccatcgatttcgccttcactgctaatgcctgcg
ccgcccccctgtagccctgagaagctcgaggactccccctctacacacagctgcgtggcc
gcccagaccagcccactacaccccgagccggagacgacagaggaaaggcctcagccccaa
ctacgaggagccacactgtcccagctgtcagacagcggacagactctgagcgaggacagt
ggagtggatatcgcagaggctggggggctgagtaaggacagcagcccgcgaccaggtaaa
cctccgttcctccaggtcacaggtgacacacgcagagcggaaggactcgcacaggcctcc
gcaaaacagatgagaggaacggagcctacacttgtacgggtgcctaagtgtgccagtaca
ctggggattgctgttgaagggggtgccaacaccagacagcctctgccgcgcatcgcgacc
atacagatgatctctctttgtggaaagtttgagacagctgcttgtttctctcttcttctt
tctgtctctcagaaggggggctgtgtgcatatctctggacagtttcgggtgggtcaggtg
attctggaggtgaatggcgtgtcgcttaaaggcatggagcaccgggacgcaactcgggtc
attgccgaggcctttaagaccaaagacaaagactatgtcgactttttgatcgccgagttc
aactctgctctgtag
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