Sinocyclocheilus grahami (golden-line barbel): 107572769
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Entry
107572769 CDS
T04918
Symbol
cngb1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
107572769 (cngb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107572769 (cngb1)
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107572769 (cngb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
107572769
NCBI-ProteinID:
XP_016114694
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MPKEQPQKSRDLELDRLVRQSPLQSPPTPSPSSPSSVLDLPNVPSYPRLPPITPSRQLSG
VSNPAFHIEDDPTSARPSVSSRLSVHPAVNVEDVDSDRGKGGRRSRPIPPIINPQDPNLK
TLTVPGARKASRTSACRDRKPQTIWTKIKRLYSQDDEEEEELETAVRAWPSQSSISSADD
GLNQRPASSASQTSTVVNERLQELVKLFKERTERVKEKLIDPDNSDDETPPASPAKQAPA
PPPPPPEPQAEQKTEQEVSEAPAEKEEEKTKVLCCKVKPQSKIGRLVQYGFPSSIDPFTN
LIYVLWLFCVSLAFNWNAWMIPVRWAFPYQTPDNIHVWLLIDYLCDAVYILDILAFQPRL
QFVRHGDLVTGKKEMRNNYIKAVRFKLDVVSLLPLELLYFKTGINPLLRLPRILKFMSFF
EFNKRLEAILTNAYVYRVIRTTTYLLYAVHCNACLYYWGSSYEGLGFSEWTYDGTGNSYF
RCYYFAVKTLLTIGGLPEPTTLFEIVFQLINYFIGVFVFSIMIGQMRDVVGAATAAQTNY
RACVDNTVKYMASYRIPKDVQNRVKTWYSYTWQSQGMLDEQELLDQLPDKMRLDIAVDVS
YNIISKVPLFQGCDRQMIFDMLKRLRSVVYLPGDYVCKKDEVGREMYIIKAGEVQVVGGP
DGKTVFVTLKAGAVFGEVSLLAVGGGNRRTANVVARGFANLLILTKRDLNEIIVHYPESQ
KLLRKKARKMVMKDKKPAEKKEEEKEPIPIIPPRAETPKLLKAALEMTEKTGMKGTWSKI
KDRSNRSSVSLQHSISSSAVPNSPVHEAHSDQDADTLSQISDSSMQIPTTPTGAGDRNAF
SEEGPAEEETK
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggagcaaccgcagaagagtagggatctggagttggaccgtctcgtccgccag
tccccgctccagtccccccctaccccttcaccctcttccccaagctccgtcctagactta
cccaatgtgccctcttacccccgtctgccacccatcaccccttccaggcagttgtcaggc
gtctccaaccctgcctttcacattgaggatgacccgacctctgctagaccctcagtgagc
tccagactgagtgtgcacccggccgtgaatgtcgaagatgtcgactccgaccgagggaaa
ggaggaagacgatctcgccccataccaccaataataaacccacaggaccctaacctcaaa
accctcaccgtccctggtgcccgtaaagccagtcggaccagtgcatgcagagacagaaaa
ccacagacaatttggaccaagatcaaaagactttactcacaagatgatgaggaagaagag
gagttagaaactgcagtccgggcctggccaagccagagtagcatctcaagtgcagatgac
gggctaaatcaacggccagcctcttcagccagccaaactagtacggtagtaaatgagagg
ttacaagagctggtcaagctgttcaaagagagaacagagcgagtcaaagagaagctgatt
gatccagataactcggatgatgaaacaccacctgcctccccagctaagcaagctccagct
cctcctcctcctcctcctgaacctcaagcagagcagaaaacagagcaggaggtatccgag
gcccctgctgagaaagaagaggagaaaacaaaggtcctgtgctgtaaagtgaaacctcag
tccaagattggtcgacttgtgcagtacggttttccatccagtatcgaccccttcaccaat
ctgatctacgtactttggctgttttgcgtgtctttggcgtttaactggaacgcgtggatg
atccctgtacgttgggcatttccatatcaaacaccggataacatccatgtttggctgttg
attgactacttatgtgatgccgtttacatactggacatcctggcctttcaacccagactg
cagtttgtgcgtcatggagaccttgtgaccggcaagaaagagatgagaaataattacatc
aaagctgtacgattcaagctggatgtggtcagtctacttcctctggaactcctctacttc
aaaacagggattaatccacttcttcgcttacccaggatcctgaagttcatgtctttcttt
gagttcaacaagcgtctggaggctatactgaccaacgcttacgtttacagagttattcga
accaccacctacttgctgtatgccgtccactgcaatgcatgtctgtactactggggctct
tcatatgaaggtctgggtttctcagaatggacctatgatgggacaggcaatagttatttt
cgctgctactactttgctgtgaagactttgctgaccattggtggtctgccagaacccaca
acactttttgagattgtgtttcagctcatcaattactttattggagtgtttgtgttctcc
atcatgattggtcagatgagagacgttgttggtgcagcgactgcggctcagacaaactat
cgtgcctgtgtggataacacagtgaagtacatggcctcctaccgcatccctaaagatgtg
cagaacagagtgaaaacctggtacagctacacgtggcagtcccaaggcatgctggatgaa
caagagctattagatcaactacccgacaagatgaggctggatatagcagtggacgtcagc
tacaacattataagtaaagtgccactcttccagggctgtgatagacagatgatctttgac
atgctgaaaaggctcagatcagtggtgtaccttccaggagactatgtctgcaagaaggat
gaagtgggtcgtgagatgtacattataaaggcaggggaagtccaggtagttggtggtccc
gatggaaagaccgtgtttgtgaccctgaaagcaggagctgtgtttggagaggtcagcttg
cttgctgtgggtggaggaaaccggcggacagctaatgttgtagcacgtggttttgctaac
ctcctcatcttgaccaaaagggacctgaatgagatcatagtgcattatccagagtcccag
aaactgctgcgcaagaaagcaaggaaaatggtgatgaaggataaaaagcctgctgagaag
aaagaggaagaaaaggagcccattccgattattcctcctcgcgccgagacgcccaaactg
ttaaaagctgcgctggagatgacagagaaaacaggaatgaaaggaacatggtccaaaatt
aaggacaggagcaacagatcgagtgtctccttgcagcactccatttcttcctctgcggtg
cccaactctccagtccatgaagcgcactcagatcaagatgcagacactctgtctcagata
tcagacagttcaatgcaaatccccacgacccccactggcgctggagacaggaatgcattt
tctgaagagggcccagcagaggaggaaactaaatag
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