Sinocyclocheilus grahami (golden-line barbel): 107574381
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Entry
107574381 CDS
T04918
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai-like isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107574381
04131 Membrane trafficking [BR:
sgh04131
]
107574381
04121 Ubiquitin system [BR:
sgh04121
]
107574381
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107574381
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
107574381
Membrane trafficking [BR:
sgh04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107574381
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107574381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4_2
zf-C3HC4
AraC_N
zf-RING_5
zf-RING_UBOX
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
107574381
NCBI-ProteinID:
XP_016116308
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MDQNDNDLQGTDGSGFLGGLDVRRQIPIKLLSKQTEKGKLPTRPQRPSTRLPSKSKEEPF
SYDQEERFECKSGDAYGNQRRFPQPIFWDYKLNLVGVKDDTPVHFCDKCGLPIKIYGRMI
PCKHVFCYDCAVRYEKKCDKMCPGLSLYSCSDPVQRIEQCQRGSLFMCSIVQGCKRTYLS
QRDLQAHINHRHMRASKTGSARPDPPHPALASDPPDRFQLPPPHLAKTHPLVPPPLQGHD
TYNHPPPASPSDLGPSPRPLPPETFRIATVTTRKHSNLITVPIHDDSGTSGPSPREPHPQ
TPPGLPPHHHPGDYTSQPVVSHPHHIMPPPQQPHYGPLAPLPPPLSIPIQHPPQGSATPH
MVYNQAPPMPTPPPPGHIISQLPPYLNHPRPGPIPPVSAHHYNPNSMPQDQGTLSPPFTQ
PGAMSPGMWPNPRGPHLPRMQGPPPQGQMPGPHHPDQSRYRPYY
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaaatgacaatgaccttcaaggaactgatggttcgggattccttggaggtctt
gatgtacgcagacagatcccaatcaagttactgtcaaaacagacggaaaaaggcaagcta
cccacccgacctcagcgtcccagcactagattgccttcaaaaagtaaagaagagcctttc
agctatgaccaagaggaaagatttgagtgtaaatctggagatgcttatggaaaccagcgc
agattccctcagccaatcttctgggattataagcttaacttggtaggagtaaaagatgac
actccagttcatttttgtgacaagtgtggtctgcccataaagatctatgggcgaatgatt
ccctgtaagcatgtgttctgctatgactgtgcagtgcgctatgagaagaaatgtgacaag
atgtgccctggtttgtccctctacagctgctcagacccggtccagcgcatcgagcagtgc
cagcgcggttccctcttcatgtgcagcatcgtgcaaggctgcaaacgcacctacctctca
cagcgagacctgcaggcccacatcaaccatcgccacatgagggccagcaagactggatcc
gctcgcccggatccgccacacccggcgctggcctccgacccaccagaccgcttccaattg
ccgccgccacacctggctaaaacacaccctctcgttcctcccccactgcaaggccacgat
acctacaaccatccacctccagcctcgccctctgatctgggaccctccccacggcccctc
cccccggaaaccttccgaatcgccacagtaactacacgtaagcatagcaacctcatcaca
gtgcccattcatgatgactctgggacctcaggtccctccccccgtgagccccacccacag
acccctcctggcctgcctccacaccatcaccctggcgattacaccagccaaccagtggtg
tcccatccgcatcacatcatgcctccaccacaacaaccacattatgggcctctagcgccc
ctaccgccccctctcagcatccccattcagcacccgccgcagggctcagccacacctcac
atggtttacaaccaagcacctcccatgccaacaccacctccacccggacacatcatcagc
cagctgccaccctacctgaatcaccctcgacctggtccgattcccccggtcagtgcacac
cactacaacccaaactcgatgccacaggaccaaggcactcttagcccaccttttacccaa
ccaggtgccatgagcccagggatgtggcccaatcctcgtggccctcatctgccccgtatg
caggggccaccaccacagggacagatgccagggcctcaccaccccgaccagtcacgatat
agaccgtattactag
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