Sinocyclocheilus grahami (golden-line barbel): 107575713
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Entry
107575713 CDS
T04918
Name
(RefSeq) contactin-1a-like
KO
K06759
contactin 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04514
Cell adhesion molecule (CAM) interaction
sgh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
107575713
04517 IgSF CAM signaling
107575713
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sgh04515
]
107575713
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sgh00537
]
107575713
Cell adhesion molecules [BR:
sgh04515
]
Immunoglobulin superfamily
Contactins
107575713
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sgh00537
]
Others
107575713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
ig
I-set
Ig_2
fn3
FN3_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
V-set_CD47
Fn3_VIN3
Fn3-III_PB4
Motif
Other DBs
NCBI-GeneID:
107575713
NCBI-ProteinID:
XP_016117546
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
SVWSVCADFPAVFGDESSGFGPVFEEQPVDTIYPEESPEDKIIMNCRTRANPPATYRWRL
DNTEIVIGNDDHYSLMGGNLVISFPDKSKHAGNYSCLASNEYGTLVSQKASVQFGYLDMF
SSDERQAVYVKEGQGAVLLCAPPPHFPEDLSFRWMLNEFPEFILLDKRRFVSQTTGNLYI
STVRASDSGNYSCFVSSPSIAKSVFSKFIPLVPIAERSLRKYPADIKVKSADTYTLLGQN
VTLECFALGNCKVSLSSDATKITLAPSNADISVGESTRMECAASHDPSLDLTFIWSLDAR
AIDFDQDREHYERKTAGTSSSELLISNTQLRHAGRYSCTAQTPVDNVTVSAELVVRGPPG
PPGGVRVDGVMTSSVRVTWSHGTDNLSPISKYSVQYRDVRAQQDWRDASTSPVNVEGNAE
MSSVINLTPWTEYEFRVIATNTLGTGPPSDPSPTITTREARPVVAPSEIGGGGGTSRELT
ITWTPVQPQYYYGSNFGYIIAFKPHKEWVIIESMRMCA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
tcagtctggtcagtgtgtgctgatttcccagcagtctttggagacgagtcgtcaggtttc
gggccggtgtttgaggagcagcctgtcgacaccatttaccctgaagagtctccagaggac
aagatcatcatgaactgcaggacacgagcaaacccaccggccacatacaggtggaggctg
gacaacacagaaatcgttattggaaatgacgatcactacagcctgatgggaggaaacctc
gtcatcagcttccccgacaagagcaagcatgctgggaactactcgtgtctggccagcaat
gagtacgggacgcttgtcagtcagaaggcctctgttcagttcggatacttggacatgttt
tcctcagacgagcggcaggcggtctatgtgaaggaggggcagggggcggtgcttctgtgt
gctccgcctccacacttcccagaggatctgtccttccgctggatgctcaatgagtttccg
gaattcattcttctggacaagcggcgcttcgtgtctcagaccaccgggaacctctacatc
tccaccgtacgagcgtcagacagcgggaactactcctgcttcgtctccagtccgtccatc
gccaagagcgtcttcagcaagttcatcccgctggtgcccatcgccgagcgttctctgagg
aaatatcccgctgatatcaaagtcaaatctgcagacacgtacacgctgctggggcagaac
gtcacgctggagtgcttcgcgctgggaaactgcaaagtgtctctctcctcagacgccacg
aagatcactctggctccgtctaacgctgacatcagtgtgggcgagagcaccaggatggag
tgcgctgcgtcacatgaccccagcctcgacctcaccttcatctggtccctcgacgcacgc
gccatcgacttcgaccaagacagagagcattacgagcgcaaaacggccgggacgtccagc
tcagagctgttgatcagtaacacacagctgagacacgcgggacgttacagctgtacagcg
cagacgccggtggacaacgtcacggtctccgcggagctggtggtcagaggtcccccaggt
cctcctggaggtgtgcgagtggacggggtgatgaccagcagcgtgagggtgacctggagt
cacgggacggataacttgagtcccatctccaaatacagcgtccagtacagagacgtgcga
gcgcagcaggactggagagacgcctccacctctccagtgaatgtggagggaaatgcagaa
atgtcctccgtgatcaatctgacgccctggacggagtatgagttcagggtcatcgccacc
aacacgctgggcaccggacccccgagcgacccctcgcccacaatcaccaccagagaagcc
aggcctgttgtggctccgtcagagatcggtggaggaggaggaaccagccgtgagctcacc
atcacatggacgccggtccagccgcagtactactacggcagtaattttggctacatcatc
gccttcaagcctcataaggaatgggtgattattgagtcaatgagaatgtgtgcttaa
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