Sinocyclocheilus grahami (golden-line barbel): 107577905
Help
Entry
107577905 CDS
T04918
Name
(RefSeq) interferon regulatory factor 6-like
KO
K09446
interferon regulatory factor 5
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107577905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107577905
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
107577905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
107577905
NCBI-ProteinID:
XP_016119720
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MRRQVDAEPSPSHRLDTSHFSVQLTKRTVFTITTSFSSTMSGQARRIRLKPWLLAQINSG
KYPGLHWLNQERRLFRIPWRHATRHMPTLEEENTVFKAWALETGKYQEGVDEPDPAKWKA
NLRCALNKSREFGLHYDGTKDTPVQPYKIYEVCDQSVNGDAGDDEEEELQNFVKLSIDPS
SYPAYPPRVDVPFTSPIADGYNPTHHNPPMNLLRDVVHNNPSGGAPMTSHLAQPSTGPSA
SSLTEFPSHSAIKVEQAPYHCGGLLNSLGMGTGVIPPPLLQDVVTHSVGPPAMVDSPMQE
VPVQEENQVHPCISELLSSPHMLPLTDLDIKFQYRGRTADSLTVSNPQGCRLYYGNLAPS
PEQVELFGPVTLQQVLFPGTTEIQNEKQRFYTDHLLDVMDRGLILEIRGQDIYAIRLCQC
KVFWSGPGVPEQGPPNPMEREMKIRVFSLNNFLQGLILYQKGEAPTPPPFEIYFCFGEDW
PDRKPKEKKLIIVQIVPVVARILTEMFSGELSWSTDSIRLQISNPDLKDQTVEQFKELHR
LLQSQNAHLTWAQNIH
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgtcaggtagacgctgaaccgagcccgagtcaccgtttggacacttctcacttt
tcagtgcagctgaccaaaagaacagtgttcaccattactacttccttttccagcaccatg
agtggtcaagcacggaggatccgtttgaagccatggctgctggcacagattaatagtggg
aaataccccggactgcactggctcaatcaagagcgcagactgttccggatcccatggaga
catgccacccgccatatgcctaccctggaggaggagaacactgtatttaaggcttgggct
ctcgaaacaggcaagtatcaggaaggagttgatgagccagatccagcaaaatggaaggcc
aacctccgctgtgccctaaacaaaagccgagagttcggactccactatgatgggactaag
gacacccctgtccagccttataagatctatgaggtgtgcgaccagtcagtcaatggagat
gccggagacgatgaggaagaggagctgcaaaactttgtcaaactctccattgacccttcc
agctacccagcataccctcctagagtagacgttccgttcacctctcctattgccgatggc
tataatcccacccaccataaccctccaatgaacctcttaagagatgttgtccataataac
cccagtggaggtgctcctatgacctctcacctcgcccagcccagcaccggaccttcggct
agttctttgactgaatttcccagtcacagtgcaatcaaagttgagcaggcaccatatcac
tgtgggggacttctgaacagtctgggaatggggactggagtcataccgccgcctcttctt
caagatgtagtcactcattctgtaggccctccagccatggtggacagcccaatgcaagag
gtgccagttcaagaggagaaccaggttcatccctgcatctcagagttgctgagcagtccg
cacatgttgcccttaacggatctagatatcaagttccagtacaggggtcggacagctgat
tctttgactgtcagtaaccctcagggttgtagactttactacggtaatctggcgccctca
ccagagcaagtagagctgttcggtccggtaacactgcagcaggtgctgttcccgggaacc
actgagatccagaacgagaagcagaggttctataccgatcatctgctggatgtgatggac
cgagggctgattttggagatcaggggacaagatatctacgccatcaggctgtgccagtgt
aaagtgttctggtctgggccaggtgtgcccgagcagggtccgcccaatccaatggaaaga
gaaatgaagatcagggtcttcagtctgaacaacttcctccagggtctcattttgtatcag
aaaggagaggcacccactccaccaccctttgagatctacttctgcttcggtgaggactgg
ccagacagaaagcccaaggagaaaaagctcatcattgtccagattgttccagttgttgca
agaatccttaccgagatgttttcaggcgagctttcgtggtccacagacagcattcggttg
cagatctccaaccctgacctgaaagaccaaacggtggagcagttcaaagagctccacaga
ctgttgcaaagtcaaaatgcgcacctcacctgggctcaaaacatccactaa
DBGET
integrated database retrieval system
