Sinocyclocheilus grahami (golden-line barbel): 107581364
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Entry
107581364 CDS
T04918
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107581364
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107581364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
RhlB
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
107581364
NCBI-ProteinID:
XP_016122388
LinkDB
All DBs
Position
Unknown
AA seq
1999 aa
AA seq
DB search
MAAHLLVPPRPDSFRPFSPESLAAIERRIAEEAAQRPKGERRPDDDDENGPKPNSDLEAG
KSLPFIYGDLPSEFVSVPLEDLDTYYSNQKTFIVLNRGKAIFRFNAMPALYILSPFNPLR
RISIKVLVHSMFSFVIMCTILTNCSFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGF
CVGKFTFLRDPWNWLDFSVILMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVKNSEVNVTENLTATLNYSTG
LELQSRFNWTEYISDESKYYFLPGRKDPLLCGNSSDAGQCPEGFTCIKVGRNPDYGYTSF
DTFSWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLVNLILAVVAMA
YDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATESGEYSGRGGLSEESSSGG
SRLSSKSAKERRNRRKKRKQREEEEKADQEKFHKSASEDSIRRPGFRFSIDANRLSYEKK
CSTPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDFGSENDFADDEHSTFEDSDSRRGSL
FVPRCIERRSSTVSHCSLAPRIMLPANGKMHCTVDCNGVVSLVGGTSVPTSPIGRLLPEG
TTTESEARKKRSGSHQPSEYLDETVARKRALSVASILTNTMEELEESRQKCPPCWYKFAN
NFLIWDCCPAWLKVKEIVNMVVMDPFVDLAITICIVLNTLFMAMEHYPMTERFNHVLSVG
NLVFTGIFTAEMCLKVIALDPYYYFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRL
LRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGRSYRECVCKI
SDDCELPRWHMDDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVV
LNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIHKGIALVKSTLRQFLQSLCLAGSK
PRALDEEKPLDDLHSDGKENCLSNHTPVVVELTKDYLKEGCFSPGNGVEGHVKYGIEEGD
YMSFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSDVEGSKEKLPVDAVLSSSEGSTVD
IRPPGEGAESVELEPEESLDPEACFTEGCVMRFQCCQVDVEQGKWKNWWILRKTCFIIVE
HNWFESFIIFMILLSSGALAFEDIYIEQRKTIKTVLEYADKVFTYIFILEMLLKWVAYGF
VKYFTNAWCWLDFLIVDVSLVSLVANALGYSELTAIKSLRTLRALRPLRALSRFEGMRVV
VNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYHCFNITSDKMFPISVVNNKSDC
FALIANNDSARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRNLEQQPDYESN
LYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGS
KKPQKPIPRPTNKFQGLIFDFITKQAFDIVIMILICLNMVTMMVETDDQTKEMDDILYWI
NLVFIILFTGECVLKMISLRHYYFTIGWNVFDFVVVILSIVGMFLSEMIEKYFVSPTLFR
VIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFAMSNFAYVK
HEAGIDDMFNFETFGNSMLCLFQITTSAGWDGLLAPILNKQDPDCDSELEHPGSMYRGNC
GNPSVGIFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWERFD
PNATQFVEYDKLSNFADALDPPLRIPKPNKIQLIAMDLPMVSGDRIHCLDILFAFTLRVL
GEEGEMDALRGQMEDRFMASNPSKVSYEPITTTLRRKQEEMSAVVIQRAFRRYRIRQTVK
KASEAYRQQLQDGSVRIPEKEVLVIGKFQENSASDKTDMTPSSASPPSYNSVAKSEKDKY
EKERREKEDKAKDARNRKK
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcatctgctcgttccacccagacctgacagcttccggcccttctcgcctgag
tctctcgctgctatcgagcgccgcatcgcagaggaggcggcccaacggcccaaaggcgag
agacggcctgatgatgatgacgaaaacgggcccaaacccaacagcgatttggaggcggga
aaatccctgccctttatctacggagaccttccgtccgaatttgtgtccgtcccgctggag
gacctggacacctactacagcaaccaaaaaacctttatagtattgaatcgtgggaaggct
atattccgctttaatgctatgccagctttgtatattttgagccccttcaatccattgagg
cgaatctccatcaaggtcctggtgcattcaatgttcagttttgtgatcatgtgcacaatc
ttgaccaactgctccttcatgaccctcagcaatcccccggactgggccaagaatgtggag
tacacgttcacagggatctacacctttgagtccctgattaagatcctggcacggggcttc
tgcgtggggaagttcactttcctgcgagacccctggaactggctggacttcagcgtcatt
ctgatggcgtatgtaactgagtttgtaaacctaggcaatgtgtcagctctccgtactttc
agagtgctcagagctttgaaaactatctcagtcatcccagggctgaagactatcgttggc
gctctgatccagtcggtcaagaagctgtcagacgtgatgatcctgactgtgttctgtctg
agtgtgtttgctctgatcggactgcagctcttcatgggaaacctgcggcagaagtgtgtg
aagaattcggaggtcaatgtcactgaaaacctgaccgccacgctgaattatagcactggt
ttagagctgcaaagccgctttaactggacagagtacattagtgatgagagcaagtattat
ttcctcccaggccgcaaagatcctttgctatgtggaaattcaagtgatgctgggcagtgt
ccagagggcttcacgtgtataaaagtaggtcgtaatcctgactacggctacacaagcttt
gacacattcagctgggccttcctctcactcttccgactcatgacacaagacttttgggaa
aacctctaccagcagaccctgcgtgcagctggaaagccctatatgatcttctttgttctt
gtgatcttcctgggctccttctatctggtgaatctcatcctggctgtggtggccatggca
tatgatgagcagaaccaggccaccatagaagaggctcaacagaaagaggaagagtttcaa
gccatgctagaacagctaaagagacagcaggaagaggcacaggttgcggcggcagcagca
acagagagtggggagtacagcgggagggggggcttgtcagaggaaagctcctctgggggg
tccagactcagctccaagagcgctaaagagcgaagaaacaggaggaagaaaagaaaacaa
agggaagaagaagagaaagccgatcaggaaaagttccataagtccgcctcagaggacagc
attagacggcctggatttcgattctccatcgatgccaaccgactctcctatgagaagaag
tgttccactcccaatcagtctcttctcagcattcgtggatctctcttttccccaaggagg
aacagtcgcgctagtctgttcagttttcgcggtagagcgcgagactttggctcagagaat
gattttgcagacgatgagcacagcacgtttgaggatagcgacagtcgccgcggatcactc
ttcgtacctcgttgtattgagagacgaagttccactgtcagtcactgcagccttgctccc
agaattatgctcccagccaacgggaaaatgcactgcacagtcgattgcaatggagtggtc
tccctggtgggcgggacatctgtgccaacatcaccaatcggacgtttgttacctgagggc
acaaccactgagtctgaggcacgtaaaaaacgttcaggatcacaccagccgtctgaatat
ctggatgagacagtagccaggaaaagagctctcagtgtggccagcattttgacaaatact
atggaagaacttgaggaatcgcggcagaagtgccctccatgttggtacaagtttgccaac
aacttcctgatctgggactgctgtccagcctggctgaaggtgaaggagattgtgaacatg
gtggtgatggatccgtttgtagacctggccataaccatctgcattgttcttaacacactc
tttatggctatggagcactaccctatgacagaaaggttcaaccatgtgctgtcagttggg
aacctggtattcacaggaatcttcacagcagagatgtgtctgaaggtaattgctctagac
ccatattactacttccaagaaggctggaatatatttgacggcatcatcgtgagcctgagt
ctcatggaactgggcctggccaatgttgagggactttctgtgttgcggtcctttagattg
ttaagagtctttaagctggcaaagtcttggcccaccctgaacatgctgataaagatcatt
ggtaactcagttggtgctttgggaaatctaaccctcgtccttgccatcatcgtcttcatc
ttcgctgtggtgggaatgcagttgtttggaaggagctaccgtgaatgtgtctgcaagata
tcagatgactgtgagttgccgcggtggcacatggatgatttcttccactccttcctgatt
gtgttccgagtgctttgcggcgaatggatcgaaaccatgtgggactgcatggaggtggcg
gggcagacaatgtgtctcatcgtcttcatgatggtcatggtcattgggaatctggtggtg
ttgaacctgttcctggccttgctgctgagctctttcagtgccgataacctggccgccacg
gatgacgacagcgaaatgaacaacctgcagatcgccgtgggcagaatacataaaggtatc
gcactggtcaaatccactttacgccagttcctccaaagcctctgcctggccggctccaaa
cctcgtgctttagacgaagagaaaccccttgacgacctccacagcgatggcaaagagaac
tgcttgtccaatcacactccggtggtcgtcgagctcactaaagactatctgaaggagggc
tgcttctcccctggtaatggagtggaaggtcacgtaaagtatggaattgaggaaggcgac
tacatgtcattcatacacaatcccagcctcactgttacagtaccgattgcggtgggagag
tcggactttgaaaatctgaacacggaagatttcagtagtgactcgtctgatgtcgagggc
agtaaagagaagctgcctgttgatgcggttctcagttcctcagaagggagcacagtggat
atccgaccccctggagagggggcggagtctgtggagctggagccggaagagtccctggac
ccagaggcctgcttcacagaaggctgtgtgatgaggtttcagtgctgtcaggtcgatgtg
gagcagggaaaatggaagaattggtggattctcaggaaaacctgcttcatcattgtagag
cacaactggtttgagtcctttatcatctttatgatattactcagcagtggagcattggct
tttgaggacatttacatcgagcaacgtaagacgataaagacagtgttggaatatgcagat
aaagtcttcacatacatctttattttggagatgcttctgaagtgggttgcttatggcttc
gtcaaatacttcaccaatgcctggtgttggcttgacttcctgattgttgatgtgtcgtta
gtgagtctggtagcaaatgctcttggttactctgaactaactgccattaagtccctgaga
acactgcgtgctcttagacctttgagagcattatcacgctttgagggaatgagggttgta
gtaaatgccctgttgggagccataccttccatcatgaatgtgctactagtgtgtttgatc
ttctggctgatcttcagcatcatgggggtgaacctttttgcggggaaatactaccattgt
tttaatatcaccagcgataagatgtttcccatcagtgtggtcaataacaagtctgattgc
tttgccttgattgcaaacaatgactcggcgcgctggaaaaatgtgaagattaatttcgat
aatgtgggagctggatacctggcgctactgcaagtggccacatttaaaggatggatggac
atcatgtacgcagctgtggattctcgtaatttggagcaacagcctgactatgaatcaaac
ctttacatgtacctgtacttcgtcatcttcattatcttcggctccttctttactcttaac
ctcttcattggtgtcatcattgataacttcaatcagcagaagaaaaagctaggaggtcag
gatatctttatgacagaagaacaaaagaaatattacaatgccatgaagaaactgggatct
aagaagcctcagaagccaattcccaggcctacgaacaagtttcaaggccttatctttgac
tttatcaccaaacaagccttcgacattgtgattatgatcctgatctgcttgaacatggtg
accatgatggtggaaaccgacgaccagacaaaggagatggatgatattctgtactggata
aacctggttttcatcatcctcttcactggagaatgtgtgctcaagatgatctccctgcgg
cactactacttcaccattggctggaatgtgtttgactttgttgtggtgattctctcaatt
gttggcatgttcctctctgagatgattgagaaatatttcgtatcaccaacattattccga
gtcatccgacttgccagaatcggccgcattcttcgactcatcaaaggagccaaaggcatt
cgtacactactgtttgccttgatgatgtcacttcctgccttgttcaatattggcctcctc
ctattcctggttatgtttatatatgccatcttcgcaatgtccaactttgcctacgtgaag
catgaggcggggatcgacgacatgtttaactttgagacattcgggaactcgatgctttgc
ttgttccagattacgacttcagcaggatgggacggcctcctggcacccatcctgaacaag
caagatccggattgcgacagcgaattggagcacccgggcagcatgtaccgtggcaactgc
ggaaacccctcggtcggcatcttcttctttgtgagctacattatcatctgcttcctgatt
gtggtgaacatgtacattgccgtgatcttggagaacttcagcgtagccacagaggagagt
gctgaaccactgagcgaggacgactttgaaatgttctatgaagtttgggagcgatttgat
cccaatgccacacagttcgtggagtacgataagctttctaactttgcggatgctctggat
cctccgttacgtatccccaagccaaacaagatccagctcatagccatggatctgcccatg
gtcagtggcgaccgcatccactgcctggacatcctgttcgcctttactctgagggtactg
ggagaggagggcgagatggatgccctaaggggacagatggaggatcgtttcatggcctcc
aatccctctaaagtctcctacgagccaatcacgacaaccctccgcaggaaacaggaggag
atgtcggccgtcgtcatccagagggccttccgacggtaccgtataaggcaaacggtaaag
aaggcctccgaagcctaccgacagcagctgcaagatgggagtgtgcgcatcccggagaaa
gaggtgctcgtcattggaaagtttcaagagaactctgcgtcggacaaaacagatatgact
ccctcctctgcctctccgccgtcttataacagcgtggccaagtcagagaaagacaaatac
gaaaaggagaggagagaaaaggaggacaaagcaaaagatgcaagaaacagaaaaaaatga
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integrated database retrieval system
