Sinocyclocheilus grahami (golden-line barbel): 107581848
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Entry
107581848 CDS
T04918
Name
(RefSeq) contactin-1-like
KO
K06759
contactin 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04514
Cell adhesion molecule (CAM) interaction
sgh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
107581848
04517 IgSF CAM signaling
107581848
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sgh04515
]
107581848
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sgh00537
]
107581848
Cell adhesion molecules [BR:
sgh04515
]
Immunoglobulin superfamily
Contactins
107581848
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sgh00537
]
Others
107581848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Fn3-III_PB4
Motif
Other DBs
NCBI-GeneID:
107581848
NCBI-ProteinID:
XP_016123040
UniProt:
A0A672K062
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MVTPAMLLCVLSYFFLLAAAIKPRIFEPRIFDKEATGFGPIFEEEPLDTVYAEDSPENKI
SMNCRARANPPAIIKWWLNNWEIKLMEQPDEHFSLVGGNLVITNPDKSKHAGKYVCVAKN
VYGTVISKEATVKFGYLNQFPTDESEPVHVKEGQGAVLLCSPPSRYPSEVMFRWIYNDFP
NFIIPDQRRFVSQTTGNLYIAKVEASDVGNYSCFVSSPTIGKSVFSMPISLIPQIEKEVK
RYPADIRVKFPKTYALVHQNITLECFALGNPLPHIRWRKLDADLPPNYEVSMNGALLHLI
NVQYEDEGSYECETLNVKGMDWYRQWLYVEGAPEWAEHINDTEKDVGSELTLRCVAVGKP
LPWIRWLKDGYSYGKGELKFSSLTFEDSGMYQCIAENEWGTIYASAELRVVSCAPTFIYN
PVKKILLGAENGRVVIECKPRSAPKPKFIWKRGSELLTNSSRMLIWDDGSLEILNVSKSD
EGSYTCYAENDRGKSNSTGTLTITEATKIIVAPSDTEAVVGDTTILQCSASYDPSLDITF
IWTVDSYVINFYTDFEHYELLNGHENSGDLLIKNIQVRHAGHYSCTAQTIVDNATAEADV
LVKGLPGPPGGVRVEEIGDTTVKLRWSLGSDHGSPLIQHVVQTLDFYALDPEDWKTASTS
PVFLDGSTESATIVHLYPWMQYEFRVHAINEFGAGENSRPSIKIKTWDARPTVAPSDVLG
QVGISGELIVTWSPVKPQFFFGKKFGYVVAFKQHEDYEWKWATVEDPETRRYVYKESMTP
DTEIQVKVNTYNNKGEGPSSLISVVYSPRLAPTEAPLDVYARQVTATEALVWWLPVYQAP
PNWVDGYQIRYWRKYDDNEAAASRVLVHRTINQTRLENMRPDSHYLIEVRAFNGAGLGPP
SEHCEMFTRRPPPSRHLRVYKYVSFNRKWLYLYWDHIYNYWNESYVEGYKILFRREGERY
GKLYTTGRHYIDFPMPETDDYVIEVRARCEGGDGPISQIRVQGKAALGAESLSVASVLLL
ALGWMSLGL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccccagccatgcttctgtgtgttctctcttacttcttcttattggccgctgca
attaaacccaggatctttgaaccccgaatttttgacaaggaggccacaggctttgggccc
atatttgaggaagagccattggacaccgtgtatgcggaggattcaccagagaacaaaatc
tccatgaactgcagagcgcgggccaaccctccggccattatcaaatggtggttaaacaac
tgggaaattaaactgatggaacaacctgatgagcactttagcctggtgggaggaaacctg
gtcatcaccaacccagataagagcaagcatgctgggaaatatgtgtgtgtggctaagaac
gtgtacggcactgtcatcagcaaagaggccactgtcaaatttggatacctaaaccagttc
cctacagatgagagcgagccggtgcatgttaaggagggacagggagcggtactgctgtgt
tctcctccctctcgctatccaagtgaggtgatgttccgctggatctacaacgacttcccc
aacttcatcataccagaccagaggcgtttcgtgtcacagaccactggaaatctgtacatc
gctaaagtagaggcatctgatgttgggaattattcttgtttcgtgtcaagccccaccatc
ggcaagagtgttttcagcatgccgatttctctgattccacaaatagagaaggaggtgaag
cggtatcccgctgatatccgtgtgaaatttcccaagacttatgctttggtgcatcagaac
atcaccttggagtgctttgcccttggaaatccgctcccacacatccgctggaggaagtta
gatgctgatctcccgcccaactatgaggtcagcatgaatggagctttactgcacctgatt
aacgttcagtacgaagatgaagggagctacgagtgtgagacgctcaacgttaaagggatg
gactggtatcgacagtggctctatgtggaaggtgctccagagtgggcggagcacatcaat
gacacagagaaagatgttggtagcgaactcactctcaggtgtgttgccgtggggaagcct
ttaccgtggatacgctggctgaaggatggctattcgtacggcaaaggggagctgaagttc
tccagtctcacatttgaggattcgggcatgtatcagtgtattgctgagaatgaatggggg
accatctatgccagcgcggagcttcgggttgtctcctgtgcaccaacattcatttataat
ccagtgaagaagattttgctcggggctgaaaacggacgtgtggttatagagtgcaaaccc
cgctctgctcctaaacccaagttcatctggaaacgaggctcagagctgctgaccaactct
tcaaggatgttaatttgggatgatggaagtctggagattctgaacgtgtcaaaaagtgac
gagggctcgtacacatgctatgctgagaatgaccgtggcaaatccaacagcacagggact
ctcactatcaccgaggccaccaaaatcatagtggctccatcagacactgaggcggttgta
ggtgacactacaattctccagtgctctgcatcatatgatcccagcctggacatcaccttt
atctggactgttgattcctacgtcatcaacttctacacagactttgaacactacgagctg
ctcaatggtcacgagaacagcggagacctgctgatcaagaacattcaggtgaggcacgca
ggacactattcctgcacagctcagaccatagtggacaatgccaccgcagaagctgatgtt
cttgtcaaaggtctgcctggtcctccaggtggcgtccgtgtggaagagattggagacacg
acagtaaaactacgatggagtctgggatcagaccacggtagtcctcttatccaacatgtt
gtccaaacactagacttttacgccctggatcctgaagactggaaaaccgcatccacctct
cctgtgtttttggacggatctacagagtcagccaccatagttcacctttacccctggatg
caatatgaattccgtgtgcatgccatcaatgaatttggagctggggaaaacagccgtccg
tccatcaaaatcaagacatgggacgccaggcctacagtagctccttctgacgtactgggg
caagtaggaataagcggagagctcatcgtgacctggagtcctgtaaagcctcagttcttc
tttggtaaaaaatttggctacgtcgtggcgtttaagcagcatgaggattatgaatggaaa
tgggcgactgtggaggatcccgagactagacgctacgtctacaaagagagcatgacccca
gacactgagatacaggtcaaagtgaacacctacaataacaaaggagaaggaccctcaagt
cttatatcagtggtctactcaccaaggctagcaccgactgaagctccattagatgtctac
gcccgccaggtcaccgctactgaagctttggtctggtggttaccggtctaccaggcaccg
ccaaactgggtcgacgggtaccagattcgttactggaggaagtacgatgataatgaggct
gctgcctctcgagtccttgtgcatagaacaattaaccaaacacgcctggagaacatgcgg
cctgactcccactacctcatagaggtacgagcgttcaacggagctgggctcgggcccccc
agcgagcattgtgaaatgttcaccaggagaccacccccaagtcgccatttgagagtctac
aaatatgtcagctttaatcgcaaatggctctatctatattgggatcacatctataactac
tggaatgagtcatatgtggagggatacaagattttgttcaggagggaaggagagcgttat
gggaagctttacaccacgggcagacactacatcgactttcccatgccagagacagacgat
tacgtcatagaggtccgagcccgctgtgagggaggtgatggacccatatcacagatcaga
gtgcaaggtaaagccgctttgggtgctgaatctctcagcgtcgcctctgtcttgctgctg
gcactgggctggatgagtttaggcctgtag
DBGET
integrated database retrieval system
