Sinocyclocheilus grahami (golden-line barbel): 107587175
Help
Entry
107587175 CDS
T04918
Name
(RefSeq) contactin-1-like
KO
K06759
contactin 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04514
Cell adhesion molecule (CAM) interaction
sgh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
107587175
04517 IgSF CAM signaling
107587175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sgh04515
]
107587175
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sgh00537
]
107587175
Cell adhesion molecules [BR:
sgh04515
]
Immunoglobulin superfamily
Contactins
107587175
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sgh00537
]
Others
107587175
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
107587175
NCBI-ProteinID:
XP_016130329
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MVTPAMLLCVLSYFFLLAAAIKPRIFEPRIFDKEATGFGPIFEEEPLDTVYAEDSPENKI
SMNCRARANPPAIIKWWLNNWEIKLMEQPDVHFSLVGGNLVITNPDKGKHAGKYVCVAKN
VYGTVISKEATVKFGYLNQFPTDEREPVHVKEGQGAVLLCSPPSRYPSEVLFRWIYNDFP
NFIIPDQRRFVSQTTGNMYIAKVEASDVGNYSCFVSSPTIGKSVFSMPIPLIPQIEKEVK
RYPADIRVKFPKTYALVHQNITLECFALGNPLPHIRWRKLDADLPPNYEVSMNGALLHLI
NVQYEDEGSYECETLNVKGMDWYRQWLYVEGAPEWAEHINDTEKDVGSELTLRCVAVGKP
LPWIRWLKDGYSYGKGELKFSSLTFEDSGMYQCIAENEWGTIYASAELRVVSCAPTFIYN
PVKKVLLGAENGRVVIECKPRAAPKPKFIWKRGSELLTNSSRMLIWDDGSLEILNLSKSD
EGSYTCYAENDRGKSNSTGTLTITEATKITVAPSDTGAVVGDTTILQCSASFDPSLDITF
IWTVDSYVIHFYTDFEHYELLMGLENSGDLLIKNIQVRHAGRYSCTAQTIVDNATAEADV
SVKGLPGPPGGVRVREIGDMSVKLQWSLGTDHGSSLIQHVVQTRDFYALDPEDWKTASTS
PVFLDGSTESSTVVDLYPWMHYYFILFLEPYINHLLTRVISLSAPTEAPLDVYARQVTST
EALVWWLPVYQAPPNWVDGYQIRYWRKYDDNEAAASRVIVHRTMNQTRLENMRPDSHYLI
EVRAFNGAGLGPPSEHCEMFTRRPPPSRLLRVYKYVSFNRKWLYLYWDHIYNYWNESYVE
GYKILFRKEGERYGKLYTTGRHYIDFPMPETGDYVIEVRARCEGGDGPISQIRVQGKASL
GPESLSVAAVLVLALGWMNLGL
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccccagccatgcttctgtgtgtgctctcttacttcttcttattggccgctgca
attaaacccaggatatttgaacccagaatttttgacaaggaggccacaggctttgggccc
atatttgaggaggagcccttggacacagtgtatgcggaggattcaccagagaacaaaatc
tccatgaactgcagggcacgggccaatcctccagccattatcaaatggtggttaaacaac
tgggaaattaaactgatggaacagcctgatgtgcactttagcctggtgggaggaaacctg
gtcatcaccaacccagacaagggcaagcatgctgggaaatatgtgtgcgtggctaagaac
gtgtatggcactgtcatcagcaaagaggctaccgtcaaatttggatacctcaaccagttc
cctacagatgagagagagccggtgcatgttaaggaaggacagggagcggttctgctgtgt
tctcctccctctcgctatccaagtgaggtgttgttccgctggatctacaacgacttcccc
aacttcatcatcccagaccagaggcgtttcgtgtctcagaccactgggaatatgtacatc
gctaaagtcgaggcatctgatgttgggaattattcttgctttgtgtcaagccccaccatc
ggcaagagtgttttcagcatgccgattcctctgattccacaaatagagaaggaggtgaag
cgctatcctgctgatatccgtgtgaaattccccaagacttatgctttggtgcatcagaac
atcactctggagtgctttgcccttggaaatccgctgccacacatccgctggaggaagtta
gacgctgatctcccgcccaactatgaggtcagcatgaatggagctttactgcacctgatt
aacgttcagtacgaggatgaagggagctacgagtgtgagacgctcaacgttaaagggatg
gactggtatcgacagtggctctatgtggaaggtgctccagagtgggcagagcacatcaat
gacacggagaaagatgttggaagtgaactcactctcagatgtgttgctgtggggaaacct
ttaccatggattcgctggctgaaggacggctattcgtacggcaaaggggagctgaagttc
tccagtctcacgtttgaggattcggggatgtatcagtgtattgctgagaatgaatggggc
accatctatgccagcgccgagcttcgcgtcgtctcctgtgcgccaacattcatttataat
ccagtgaagaaggttctgctcggggctgaaaacggacgtgtggttatagagtgcaaaccc
cgtgctgctcctaaacccaagttcatctggaaacgaggctcagagctgctgaccaactct
tcaaggatgttaatttgggatgatggaagtctggagattctgaacttgtcaaaaagtgac
gagggctcgtacacatgctatgcagagaatgaccgcggcaaatccaacagcacagggacc
ctcactatcaccgaggccaccaaaatcaccgtggctccatcagacactggggcggttgta
ggagacaccacgattctccagtgctctgcatcgttcgaccccagcctggacatcaccttc
atctggactgttgattcctacgtcatccacttctacacagacttcgaacactacgagctg
ctcatgggtctcgagaacagcggagacctgctgatcaagaacattcaggtgaggcacgca
ggacgctattcctgcacagctcagactatagtggacaacgccaccgcagaagctgatgtt
tctgtcaaaggtttgcctggtcctccaggaggcgtccgtgtgagagagattggagacatg
tcagtaaaactacaatggagtctgggaacagaccacggtagttctcttatccaacatgtt
gtacaaacacgagacttttatgccctggatcctgaggactggaaaaccgcatccacctct
cctgtgtttttggacggatctacggagtcgtccaccgtcgttgacctttacccctggatg
cattattattttattttattcctggaaccttatattaatcatcttttgacacgtgtaata
tctctctcagcgccgactgaagctccgttagatgtctacgcccgccaggtcacctctaca
gaagctttggtctggtggttaccggtctaccaggcgccgccaaactgggtcgacggatac
cagattcgttactggaggaagtacgatgataatgaggctgctgcctctcgagttattgtg
cacagaacaatgaaccaaacacgcctggagaacatgcgacctgactcccactacctcata
gaggtacgagcgttcaacggagctgggctcgggccacccagcgagcattgtgaaatgttc
accaggagaccacccccaagtcgcctattgagggtctacaaatatgtcagcttcaatcgc
aaatggctctatctgtattgggatcacatctataactactggaatgagtcctatgtggag
ggatacaagattttgttccggaaggaaggagagcgttatgggaagctttacaccacaggc
aggcactacatcgactttcccatgccagagacgggcgattacgtcatagaggtgcgagcc
cgctgtgagggaggtgatggacccatatcacagatcagagtacaaggtaaagcctctctt
ggcccggagtctctcagcgttgccgctgtcttggtgctggcactgggctggatgaattta
ggcctgtag
DBGET
integrated database retrieval system
