KEGG   Sinocyclocheilus grahami (golden-line barbel): 107595847
Entry
107595847         CDS       T04918                                 
Name
(RefSeq) splicing factor 3B subunit 1-like isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107595847
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sgh03041]
    107595847
   03036 Chromosome and associated proteins [BR:sgh03036]
    107595847
Spliceosome [BR:sgh03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107595847
 Complex B
    107595847
 Complex C
   U2 SnRNP specific factors
    107595847
Chromosome and associated proteins [BR:sgh03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    107595847
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ TPR_DNAAF5 HEAT_EF3_N HEAT_MROH2B_C HEAT_ECM29 TPR_IPO5 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG TPR_IMB1 VPS15-like_hel Adaptin_N Phage_T7_Gp15 UNC45-central
Other DBs
NCBI-GeneID: 107595847
NCBI-ProteinID: XP_016141911
UniProt: A0A672SW04
LinkDB
Position
Unknown
AA seq 1311 aa
MAQIAKTHDDIEAQILEIQGMKAALVEGAEQGVGLDSTGYYDQEIYGGSDSRFAGYVTSI
AANEQEDDDDEDSSTSLLGQKKPGYHAPVAILNSIPQSDEQYDPFAEHRPQKISDREDEY
KKRRQKMIISPERHDPFADGGKTPDPKMQVRTYMDVMKEQHLSKEEREIRLQMIEKAKSG
ELKAVNGSAASQAAGAKRKRRWDQTADHTPSNTTPRKVSSWDQADGGSDTPGHTPSSSRW
DETPGRSKGSETPGATPSTRMWEPTPSHTPAGAATPGRDTPGHATPGHGGATSSVRKNRW
DETPKTERETPGHGSGWAETPRTDRGDESVGETPTPGASKRKSRWDETPASQMGSSTPLL
TPGKTPLGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDEELDAMFPEGYK
VLPPPAGYVPIRTPARKLAATPTPIGGMTGFHMQTEDRSMKQVNDQPSGNLPFLKPDDIQ
YFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFN
QILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG
REIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCK
SKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALA
EAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLIL
IREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQL
VDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLI
DGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAAD
LISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPI
KDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAI
RRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALM
NEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQ
HMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQG
LFHPARKVRDVYWKIYNSIYIGSQDALIAHYPLIFNDEKNSYVRFELDYFL
NT seq 3936 nt   +upstreamnt  +downstreamnt
atggcgcagatcgccaaaacacatgacgacattgaggctcagatcctggaaatccagggg
atgaaagctgccctggtggagggagctgagcagggggttgggcttgattccactggatat
tatgaccaggagatctacggaggcagtgacagccgctttgctggatatgtgacttcaatt
gctgccaacgagcaggaagatgatgatgatgaagattcatccacaagtctgcttggacag
aagaaaccaggatatcatgcaccggttgcaatactcaattccattcctcagtcagatgag
cagtatgatccctttgctgaacacagaccacagaagatttcagaccgtgaggacgagtac
aagaaacgcagacaaaagatgatcatctccccagagcgtcacgatccatttgctgatggg
ggcaaaacaccggaccccaagatgcaggtcaggacgtacatggatgttatgaaggagcag
catctgtccaaagaagagagagagatcaggctgcagatgatagagaaagctaaatctgga
gagctgaaagcagtgaatggctctgctgcatctcaggctgctggggctaaacgcaaacga
cgctgggaccagacagctgaccatacccccagcaacaccacacccagaaaagtgtccagt
tgggaccaggcagatggaggttctgatactccaggacacacaccttccagcagtcgctgg
gatgagacacctggccgttccaaaggtagcgagaccccgggagccactccgagcacccgt
atgtgggagcccacaccaagccacaccccagctggagctgccacaccaggtcgagacacc
cctggacatgctactcccggccacggaggggccacttccagcgtgcgcaagaaccgctgg
gatgagacaccaaagacagagagagagacacctggtcatggcagtggctgggctgagact
ccacgtacagacagaggagatgagtcagtgggtgaaacgcccaccccaggtgcaagcaag
aggaagtcaagatgggatgaaacaccagccagtcagatgggctcttcaactcctctgctc
acccctggaaaaacccctcttggcacacctgctatgaatatggccacacccactccaggt
catctgatgagcatgaccccagaacagctgcaggcttggcgttgggaacgagagattgat
gagaggaatcgcccattgactgatgaggaacttgatgccatgtttccagaaggatacaaa
gtactgcctccaccagcaggctatgtgcccatccgcaccccagcccgtaagttagcggcc
acccccacccccatcggaggcatgactggcttccacatgcaaacagaggacagatctatg
aaacaagtcaacgatcagccctctggaaacctgcccttcctcaagccagatgacatccaa
tactttgataaactgctggttgaagttgatgagtccaccctcagtccagaagaacagaag
gagcgcaagatcatgaagctgctcctaaagatcaagaatggaacgcctcccatgagaaag
gctgctcttcgtcaaattacagataaagccagagagtttggtgcaggacccctctttaac
cagatcctgccactgctgatgtctcctacactggaggaccaggaacgtcatctcttggtg
aaagtcattgatcgtatcctgtacaaacttgatgacttggttcgaccatacgtccacaag
attcttgtagtgattgagcccttgctgattgatgaagattactatgctagagtagagggt
agagagatcatctccaacttggcaaaggctgctggtctggccactatgatctccaccatg
aggcctgacattgacaacatggacgagtatgtgagaaacacgacagctcgtgctttcgcc
gttgtggcgtctgccctgggcattccatctctactgcctttcctcaaggctgtttgcaag
agcaagaaatcctggcaggctcgtcacacgggtatcaagattgtacagcagatcgctatt
ctcatgggctgtgctatcctgccccatctccgcagcttggtggagattatagagcatggt
ctcgtggatgagcagcagaaagtgcgaaccatcagtgctctggctatcgctgccctggct
gaagctgctacaccatacggtattgagtcttttgattctgtgctgaaacctctttggaaa
ggtatcaggcaacacagaggcaagggtcttgctgcctttttgaaagccattggatacttg
attccgcttatggatgctgaatatgccaactattacaccagagaagtgatgcttatcctt
attcgagagttccagtctcctgacgaggagatgaagaagattgtcctcaaggtggtgaag
cagtgctgtggcacagatggtgtggaagccaattacattaaaacagagattttgcccccc
ttctttaaacatttctggcagcaccgaatggcattggatagacgcaactacagacagtta
gtggacactacagtggagctggctaataaggtgggggcagctgagattatttcccgtatc
gtggatgacttgaaggatgaagctgaacagtacagaaaaatggtcatggagaccattgag
aaaatcatgggcaaccttggtgcagctgacattgatcacaaactggaggagcagcttatt
gacggtatcctgtacgccttccaggaacagactactgaggactctgtaatgctaaatggc
ttcggtacggtggtaaatgctttgggtaagagagttaaaccgtacttgcctcagatctgc
ggtacagtgctgtggcgtctgaacaacaaatccgccaaagtccgtcaacaggctgctgac
ctgatttctcgtacagcggtggtcatgaagacatgccaagaggaaaagctcatgggccat
ttgggtgtggtgttgtatgagtatctgggagaagaatacccagaagtgctgggtagcatt
cttggagcccttaaagctattgtcaatgttattggtatgcacaagatgacaccaccaatc
aaagacttgcttccacgtttaactcccatcttgaagaacagacatgagaaggtgcaagag
aactgcattgatctagtgggcagaatcgctgacaggggtgcagagtatgtgtctgccagg
gaatggatgcgcatctgttttgaattgttggagttgttgaaagcccacaagaaggccatc
cgcagagctactgtcaatactttcggctacattgccaaggccattggtcctcacgatgtg
ctggccacgctgctcaacaatctgaaggtgcaggagcgtcagaaccgtgtgtgcacaacg
gtagccatcgctatcgtggccgagacttgttcgccttttactgtgcttcctgcgttgatg
aacgagtaccgtgttcctgagcttaatgttcagaacggtgtcctaaagtctctgtccttc
ctgtttgagtacattggtgaaatgggcaaagattatatctatgctgtcacacctttgttg
gaggatgctctgatggaccgggatcttgtacacaggcagacagccagtgcagtggtgcag
catatgtctctgggagtttatggctttggctgtgaagattctctcaatcatttgctcaac
tatgtttggccaaatgtgttcgaaacgtctcctcatgtcatccaagctgtcatgggggcc
ctcgagggtctgcgggtggcaattgggccctgtcgcatgctgcagtattgcttgcagggt
ttgttccatcctgcacgcaaagtgcgtgatgtgtactggaagatctacaactccatctac
atcggctcccaggatgcactgatcgcacattatcctcttatcttcaatgatgagaagaac
tcatacgttcgctttgagctggattacttcctgtga

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