Sinocyclocheilus grahami (golden-line barbel): 107602106
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Entry
107602106 CDS
T04918
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
107602106
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107602106
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107602106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
DUF2264
Motif
Other DBs
NCBI-GeneID:
107602106
NCBI-ProteinID:
XP_016150001
LinkDB
All DBs
Position
Unknown
AA seq
1078 aa
AA seq
DB search
MFSWVIKVVPQPPASPGKLAEEDQTNASTAAPDVTKKEEVKQETSKSTEEVSDENSSQSR
VLSWLSHGFSNALPQPVNSSKLANSEVKHEENAVSSSNTSDQAGMIGWIVQGLGKVVPQP
DEKYKGHTEPEEVTELAVPVVKVDPPVQEVKGVRDAEPLPHIPVVEVVSDEDPDASNVPF
SPRVIEWIKHGFEKVVPHSPVHLHPPAATEAPAQKAASAPVTPCKQEPAPAPAPAPTPAP
APPPAPAPAPAPAPAPPPAPAAPPAPSSAPAAPEQPKVAEDSKGTNMVGWIVQGFGRIIP
QPVLKPKEDSSDVVQNVCILQDPCDMVLEEVGSDWEAQQREQGSGQDVQAEEQVPQEGSS
LLQVLPNILPHMLAMQEQEDAETQTERWTPLIESIKKEAEENAIANIEERLQQECVEAAR
IAEDLARQAAELAVRQLEEEQTTQIIIDTKTEELDNEDQLPNIQEEENEEDPELQPLGEE
SEEEREDSKITDADMKRSLVDVCPAEPSPHESEVSDQALQADPVSPLVTTQPQRATSLPP
DADQEEEPPEEGCGVPASCSGIKSWILRIPHASTCLSSLHLLKNNNVPLPKMPSDLLLLY
QEISQLPKQANQCFQNVIHRLNILKPMYLLILSFTDLIYVVWLFFVTLAWNWNAWLIPVR
CTFPYQTSENIHWWLLMDYFCDGIYILDIFVMQPRLQFVRGGDIVCDKIAMRDNYRQTER
FKPRLQFVRGGDIVMRDVFGAATAGEAYYRHCVDSTVKYMSSYKIPREVQNRVKIWYDYT
WKSQGMLDEQELLIQLPDKMRLDIAADVNYSIVSKVALFQGCDRQMIFDMLKRLKSVVYL
PGDFVCKKGEIGREMYIIKAGEVQVVGGPDGMTVFVTLRAGSVFGEISLLAGGGGNRRTA
NVKAHGFANLFILDKKDLAEILVHYPESQKILRKKAKKMLTKDKKPADEKGQAKETGEVI
PQRPETPKLYKAALEVGTGQTFAKLKETYKGATLEPSTPASGRTSTAPVPPPSPMHRRSP
IPRPHVPDEDDMVSETTDSTMIIRMTPRIEGEEILSVEISPGEGVEAEAEDPSKTTDK
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctgggtgataaaggttgttccccagcctccagcatctcctgggaagctggca
gaggaggaccagaccaatgcttccactgcagcaccagatgtgacgaaaaaagaggaagta
aaacaagaaacttccaagtcaacggaggaggtctcagacgagaacagctctcagagtagg
gttttgagttggctctctcatgggttcagcaatgctctccctcagccagtaaactcctct
aaactggccaacagtgaagttaagcatgaggagaatgcagtgagcagcagtaacacatcg
gaccaggctggaatgataggctggattgtgcagggactgggaaaagtggttccacagcca
gatgagaaatacaagggtcacacagagccagaggaggtcactgagcttgcagttccagtg
gttaaagtggatcctccagtgcaagaggtcaaaggcgttcgtgatgctgagccgctgcct
catattcctgtggtggaggttgtgtctgatgaggacccagatgcttctaatgtgcccttc
tctcccagagtaatagaatggattaagcatggttttgagaaggtagttccacattctcct
gtccatcttcatcctcccgctgctacagaggcacccgcccagaaggctgcttctgctcct
gtgactccctgcaaacaagagccagcacctgcacctgcacctgcaccaacacctgctcct
gcacctccaccagcgcctgcacctgcacctgcaccagcaccagcacctccacctgcacct
gcagccccacctgcaccttcatctgcacctgcagctcctgagcaacctaaagtagctgag
gattccaaaggcacaaatatggttggctggattgtacaggggttcggacgcatcatacca
caaccagtactgaaaccaaaagaggacagctctgatgtcgttcaaaacgtctgcatcctg
caggacccgtgtgatatggtgctggaggaggtgggctcagactgggaggcccagcagagg
gagcagggctcggggcaggacgtacaggctgaggagcaggtgccacaggagggctcatcc
ctgctgcaggtgctgcccaatatcctgccgcacatgctggccatgcaggagcaggaggac
gcagagacccagactgagcgctggacgcctctcattgagagcatcaagaaggaagcagag
gagaatgccatagcaaacatagaggagagacttcagcaggagtgtgtggaagcggctcgc
atagcggaggatctggcccggcaggctgcagaattggccgtcagacagctggaggaagag
caaaccacacagatcatcatcgacacgaaaacagaagagctggacaatgaggatcaactg
ccaaatatccaggaggaagagaatgaagaagatccggagttacagccgctcggtgaagag
agtgaggaggagagagaggatagtaagatcacagatgctgacatgaaaaggagcctggtg
gacgtctgccctgcggagccctcgccacatgagtctgaggtttcagatcaggcactacaa
gcagatccggtctcaccgctcgtgaccactcagcctcagcgtgccacatctttacctcct
gatgctgaccaggaagaggaacctcctgaagaaggatgtggagtgcctgctagctgttct
ggcataaagagctggattcttcgcatcccccatgcttccacatgtctgagcagcttacac
ctgctgaaaaacaataatgttcccctgcccaagatgccctccgatctcctgctgctatac
caggagatatcccagcttccaaaacaagccaaccagtgcttccagaacgttatccatcgc
ctcaacatcctcaagcccatgtacctgctgattctttctttcacagacttgatctacgtg
gtgtggctgttctttgtgaccctcgcgtggaactggaatgcttggctgatccctgtgcgc
tgcactttcccgtaccagacatctgagaacattcactggtggctgctgatggactacttc
tgtgatggcatttatattctcgacatctttgttatgcagcccagactgcagtttgtgaga
ggaggggacattgtgtgtgacaaaatagcaatgagagacaactacaggcaaacagagcga
ttcaagcccagactgcagtttgtgagaggaggggacattgtgatgagagatgtatttgga
gccgccaccgcgggtgaggcctattatagacactgtgtggacagcactgtcaaatacatg
agttcctacaagatcccccgtgaggtccagaaccgcgtcaagatctggtacgattacacc
tggaagtcgcaaggcatgctggatgaacaggagttacttatacagctgccagataagatg
cgtctggacatcgctgcagatgtcaactacagcattgtcagtaaagtggcgctctttcag
ggatgtgacagacagatgatatttgacatgctcaagaggctgaaatccgtggtgtacctt
ccgggagattttgtttgtaaaaaaggtgagatcggccgagagatgtacatcatcaaagct
ggagaggtgcaggtggttggaggacctgatgggatgacggtgtttgtgactctgagagct
ggctctgtgtttggggaaattagtttgctggcgggtggaggtgggaaccgacgaacagct
aacgtaaaggcccatggttttgctaacctcttcatcctggataagaaggacctggcagaa
atcttagtgcactaccccgagtcccagaagatactgcgcaagaaggccaagaaaatgttg
accaaagataagaagcctgcagatgagaagggccaggctaaagagacgggtgaggtcatc
cctcagcggccggagacgcccaaactatacaaggctgcactggaggttggcacaggacag
acttttgccaagctgaaggagacatataagggagcaactctagagccgtccactcccgca
tccggcaggacctccacagctccagtgcctcctccctcacccatgcaccgccgttccccc
attccccggcctcacgtcccagatgaagatgacatggtatcagagaccaccgacagcacc
atgatcatccgcatgaccccccgcattgagggagaggagatcctatctgtggaaatcagt
cctggagagggagtggaggcggaggcggaagatccaagcaaaactactgacaagtga
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integrated database retrieval system
