Sphingopyxis granuli: SGRAN_1706
Help
Entry
SGRAN_1706 CDS
T04372
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sgi
Sphingopyxis granuli
Pathway
sgi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SGRAN_1706 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgi03400
]
SGRAN_1706 (uvrB)
DNA repair and recombination proteins [BR:
sgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SGRAN_1706 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SGRAN_1706 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_16
DUF87
SWI2_SNF2
DUF2963
AAA_33
AAA_22
FATC
Kinesin
AAA
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AMG74086
UniProt:
A0AA86GL09
LinkDB
All DBs
Position
complement(1868803..1870989)
Genome browser
AA seq
728 aa
AA seq
DB search
MAIQIRTSLDEIDTSGDYVPHRPARPDKVEGGKRFELVSDYQPAGDQPTAIRELVDTARA
GERDQVLLGVTGSGKTFTMAKVIEELQRPALILAPNKILAAQLYGEFKSFFPNNAVEYFV
SYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVIIVASVSCLYGIGS
VETYSAMIFDLKKGQVVDSGEIIRKLVALQYKRNDQAFSRGNFRVRGDSLEIFPSHYEDM
AWRVSFFGDEIEEITEFDPLTGKKIANLNYVRVFANSHYVTPGPTLKQASEAIRHELAER
LKELEVEGRLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYLP
DNALLFVDESHQTIPQIGAMSKGDHRRKITLAEYGFRLPSCIDNRPLRFAEWDAMRPQTV
SVSATPGTWEMDRTQGVFAEQVIRPTGLIDPPVIIRPVEEQVDDLIAEAKATAAQGYRTL
VTTLTKRMAEDLTEYLHEAGLKVRYMHSDVETLERIEIIRDLRLGVFDVLVGINLLREGL
DIPECGLVAILDADKEGFLRSETSLVQTIGRAARNVDGRVILYADRITGSMERAMRETDR
RREKQQAYNTEHGITPTTIKRNIGDIIAHVASKDQVTIDLGDNKPDHMVGHNLRAYIAEL
EKKMRDAAADLEFEEAGRLRDEIRRLEADELGLPPDEQVAPRVGRSNEGKPGTRKGRFGK
QSKTKWGR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcaatccagattcgcacctcgctcgacgaaatcgacaccagcggcgattatgtcccg
caccgccccgcacgtcccgacaaggtcgagggcggcaagcgcttcgaactggtcagcgac
tatcagcccgccggcgaccagccgaccgcgatccgcgaactggtcgacaccgcgcgcgcg
ggcgagcgcgaccaggtgctgctcggcgtgaccggatcgggcaagaccttcaccatggcc
aaggtgatcgaggaattgcagcgccccgcgctgatccttgcgccgaacaagatcctcgcg
gcgcagctctatggcgagttcaagagcttcttcccgaacaatgcggtcgaatatttcgtc
agctattacgactattaccagcccgaagcctatgtcccccgctccgacacctatatcgag
aaggagtcgagcgtgaacgaggcgatcgaccgcatgcgccactcggcgacgcgcgcgctg
ctcgaacgcgacgacgtgatcatcgtcgcctctgtatcgtgcctttacggcatcgggtcg
gtcgaaacctattcggcgatgatcttcgacctcaagaagggacaggtcgtcgacagcgga
gagatcatccgcaagctggtggcgctgcaatacaagcgcaacgatcaggccttttcgcgc
ggtaatttccgcgtccgcggcgacagcctggaaatctttccctcgcactatgaggatatg
gcgtggcgcgtcagcttcttcggcgacgagatcgaggagatcaccgagttcgacccgctg
accggaaagaagatcgccaacctgaattatgtccgcgtcttcgccaattcgcactatgtg
acccccggcccgaccctgaaacaggcgagcgaggcgatccggcacgaactggccgaacgg
ctgaaggaactggaagtcgaaggacggctgctcgaggcgcaacggctggaacagcgcacc
aatttcgacctcgaaatgatcgcggcgaccggaagctgcgcgggaatcgagaattacagc
cgcttcctgaccggccgcctgcccggcgagccaccgccgacgctgttcgaatatctgccc
gacaacgcgctgctgttcgtcgacgagagccaccagacgatcccgcagatcggcgcgatg
tcgaagggcgaccaccgccgcaagatcacgctggccgaatatggcttccgcctcccctcc
tgcatcgacaaccggccgctgcgcttcgccgaatgggatgcgatgcgaccgcagacggtc
agcgtttcggccacccccggcacatgggagatggaccgcacgcagggcgtcttcgccgaa
caggtgatccgtcccaccggcctgatcgatccgccggtgatcatccgcccggtcgaggag
caggtcgacgacctgatcgccgaggcgaaggcgaccgcggcgcaaggataccgcaccctc
gtcaccacgctgaccaagcggatggccgaagacctgaccgaatatctgcacgaggcgggg
ctgaaggtccgttacatgcattcggacgtcgagacgctggagcgcatcgagatcatccgc
gacctgcggctcggcgtgttcgacgtgctcgtcggcatcaacctgctgcgcgaggggctc
gacattcccgaatgcgggctggtcgcgatcctcgatgccgacaaggagggcttcctgcgc
agcgagaccagcctcgtccagacgatcggccgcgcggcgcgcaacgtcgacgggcgcgtc
atcctctatgccgaccgcatcaccggcagcatggagcgcgcgatgcgcgagaccgaccgc
cgccgcgaaaaacagcaggcgtataataccgaacacggcatcacgccgaccacgatcaag
cgcaatatcggtgacatcatcgcgcatgttgcgtcgaaggatcaggtcacgatcgacctg
ggcgacaacaagcccgaccatatggtcggccacaatctgcgcgcctatatcgccgagctc
gaaaagaagatgcgcgacgccgccgccgacctggagttcgaggaagccggccgcctgcgc
gacgagatccgccggctggaggccgacgaactaggcctgcccccggacgaacaggtcgca
ccgcgcgtgggacgctcgaacgaaggcaagccgggaacgcgcaagggacgcttcgggaag
cagagcaagacgaagtgggggcggtag
DBGET
integrated database retrieval system
