Sphingopyxis granuli: SGRAN_3165
Help
Entry
SGRAN_3165 CDS
T04372
Symbol
mfd
Name
(GenBank) Transcription-repair-coupling factor
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
sgi
Sphingopyxis granuli
Pathway
sgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SGRAN_3165 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgi03400
]
SGRAN_3165 (mfd)
Enzymes [BR:
sgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SGRAN_3165 (mfd)
DNA repair and recombination proteins [BR:
sgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SGRAN_3165 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecG_dom3_C
RecG_wedge
Cdd1
TsaE
Flavi_DEAD
AAA_30
DUF3638
Motif
Other DBs
NCBI-ProteinID:
AMG75509
UniProt:
A0AA86GM33
LinkDB
All DBs
Position
complement(3472807..3474873)
Genome browser
AA seq
688 aa
AA seq
DB search
MRPEILNPLFAALTDLKGVGPQLAKPLARLGLERVVDVLFHLPTGLISRIPVERLDQAQP
GQTIIVDLTAQDYRSGRSPRAPFGVEAVDGAGDHVRLVYFGRTSGLARKLFPLGEKRRVS
GRLDLYGDMRQIVHPDHVAEPGDETAIAEHEPVYPLTEGLTNARLSQLAEVALDRRPDLA
EWIDAPLLASRGWPAWREAMARAHAGPRDEAARDRLAYDEIFASQVALMLIRQGLRNRKG
RPIAGNGRLTGALKLPFGLTGAQERVGREIAGDMAQDVPMLRMLQGDVGSGKTLVALRAM
LTAVEAGTQAALLAPTEILARQHHATLQQMLVGLPVNLAILTGRDKGKVRESTLMGLADG
SIDILVGTHAIFQQAVGYRDLALVVVDEQHRFGVAQRLMLTDKGARPPHLLVMTATPIPR
TLLLANHGEMDVSRLDEMPPGRTPVDTRVVSVDRLDEVIDGLGRHLASGAQAYWVCPLVA
ESEASELAAAEDRAALLRERFGADAVGLVHGRMKGPDKDAVMARFEAGEIGVLVATTVIE
VGVNVPAASLMIVEHADRFGLAQLHQLRGRVGRGTAKSVCLLLRSQNLSETARERLALMR
ETNDGFVIAERDLELRGGGELLGLKQSGDADYRLATPEQLVRLLPVAHDDARLFVERDGG
MDGPRGEAVRLCLYLFERDAAVPLLRSG
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcgacccgaaatcctcaacccgctctttgccgcgctgaccgacctcaagggcgtcggg
ccgcagctcgccaaaccgctggcgcggctcgggctggagcgcgtcgtcgatgtgctgttc
catctgccgaccggcctgatctcgcgcattccggtcgaacggctcgatcaggcgcagccg
gggcagacgatcatcgtcgatctgaccgcgcaggactatcgttccggccgctccccgcgc
gcgcccttcggtgtcgaggccgtcgatggcgcgggcgatcatgtgcggctcgtctatttc
gggcgcacctccggcctcgcgcgcaagctgttcccgctgggggaaaagcgccgcgtgtcg
gggcggctcgacctctatggcgacatgcgccagatcgtgcaccccgatcatgtcgccgag
ccgggggacgaaaccgccatcgcggagcatgagcccgtctacccgctcaccgaggggctg
actaacgcgcggctgtcgcagcttgccgaagtggccctcgaccggaggcccgacctcgcc
gaatggatcgacgcgccgctgctggcaagccggggctggccggcctggcgcgaggcgatg
gcgcgcgcgcatgccggcccgcgcgacgaggcggcgcgcgaccggcttgcctatgacgag
attttcgcgagccaggtcgcgctgatgctgatccggcaggggctgcgcaaccgcaagggc
cggccgatcgccggcaacgggcggctgaccggcgcgctgaagctgcccttcggcctaacc
ggcgcgcaggagcgggtcgggcgtgagatcgcgggcgacatggcgcaggacgtgccgatg
ctgcgaatgctgcagggcgacgtcgggtcgggcaagacgctggtggcactgcgcgcgatg
ctgacggcagtcgaggcggggacgcaggcggcgttgcttgcgccgaccgagatattggca
cgccagcatcatgcgaccttgcagcagatgctcgtgggcctgccggtcaacctcgcgatc
ctgaccgggcgcgacaagggcaaggtgcgcgaatcgacgctgatggggctcgccgacggc
agcatcgatatcctcgtcggtacccacgcgatcttccagcaggcggtcggctaccgcgac
ctggcgctggtcgtcgtcgacgaacagcatcgcttcggcgtcgcgcagcggctgatgctg
accgacaagggcgcgcggccgccgcacctgctggtgatgaccgcgacgccgatcccgcgc
acgctgctgctcgccaatcatggcgagatggacgtgtcgcggctcgacgagatgcccccg
ggccgcacgcccgtcgacacgcgcgtcgtctcggtcgaccggctggacgaggtgatcgac
gggctcgggcgccatctggcgagcggcgcgcaggcctattgggtctgcccgttggttgcg
gagagcgaagcgagcgaactcgcggcggcagaggatcgcgcggcgctgctgcgcgaacgc
ttcggcgccgacgcggtcgggctcgtccatgggcggatgaaaggccccgacaaggatgcg
gtgatggcgcgcttcgaagcgggcgagatcggcgtcctcgtcgcgacgacggtgatcgag
gtcggcgtcaacgtccccgcggcgagcctgatgatcgtcgagcacgccgatcgcttcggc
ctcgcgcagctccaccagcttcgtgggcgtgtcgggcgcgggacggcgaaatcggtgtgc
ctgctgctgcgctcccagaatctgtcggagacggcgcgtgagcggctcgcgctgatgcgc
gagacgaacgacggcttcgtgatcgccgagcgcgatctggaactgcgcggcggcggcgaa
ctgctcgggctcaagcagtcgggcgacgccgattatcgccttgcgacgccggagcaactg
gtgcgcctgctccccgtcgcgcacgacgacgcccgcctgttcgtcgaacgcgacggcggc
atggatggcccgcgcggcgaggcggtgcgcctgtgcctctatctgttcgagcgcgacgcg
gcggtgccgctcctgcgcagcggctga
DBGET
integrated database retrieval system
