Streptomyces goshikiensis: PET44_07125
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Entry
PET44_07125 CDS
T09307
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
sgk
Streptomyces goshikiensis
Brite
KEGG Orthology (KO) [BR:
sgk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sgk03051
]
PET44_07125 (pafA)
Enzymes [BR:
sgk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
PET44_07125 (pafA)
Proteasome [BR:
sgk03051
]
Prokaryotic proteasome
Bacterial regulatory particles
PET44_07125 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
WBY19420
LinkDB
All DBs
Position
complement(1703534..1704895)
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNLTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLICGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGQRKVRLASGREASALEIQREYYDKAVDFAERRGIRTGVV
DQVLELWGRTLDSIESEDLDRIGTEIDWVMKYQLIERYRAKHDMTMSNPRVAQIDLAYHD
IHRRRGLYYLLERKGQAARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgactgtctcctgacgaagtggcgcgctacctcttccgccgtgttgtgtcatgg
ggccgcagcagcaatgtcttcctgcggaacggcgcccgcctctacctcgacgtgggttcg
catccggaatacgcgacaccggaatgcgacaacctgaccgaactggtcactcacgacaag
gccggcgagcgcattctcgaaggcctgctcgtcgacgccgaacgccgcctgcacgaggag
ggaatcgcgggcgacgtctacctcttcaagaacaacaccgactcggcgggcaattcgtac
ggctgccacgagaactacctcgtggcgcggcacggagaattctcccgcctggcggacatc
ctcattccgttccttgtcacgcggcagctgatctgcggcgcgggcaaggtgctgcagact
ccgcggggcgcggtctactgcgtcagccagcgggcggagcacatctgggagggcgtcagc
tcggcgacgacccggtcccggccgatcatcaacacgcgggacgagccgcacgcggacgcg
gagcgctaccggcgtctgcacgtgatcgtcggcgactcgaacatgtccgagacgaccatg
ctgctgaaggtcggtgccaccgacctggtgctgcgcatgatcgaggcgggcacggtgatg
cgggacctgaccctggagaacccgatccgggcgatccgtgaggtcagtcacgacatcacg
ggccagcgcaaggtgcgcctcgccagtggccgggaggcctcggcgctggagatccagcgg
gagtactacgacaaggcggtggacttcgccgagcgccggggcatccgtacgggtgtagtg
gaccaggtgctggagctgtggggccgtaccctcgactcgatcgagtcggaggacctggac
cggatcggcacggagatcgactgggtcatgaagtaccagctgatcgagcggtaccgggcc
aagcacgacatgacgatgtcgaatccgcgggtcgcccagatagacctcgcctatcacgac
atccaccgccggcgaggtctgtactacctgctggagcgcaaggggcaggcggcgcggatc
tgcaacgacctgaagatcttcgagggcaagtcggtgcccccgcagacgacccgggcgcgg
ttgcgcggtgacttcatccgccgggcgcaggagcagcgccgggacttcacggtggactgg
gtgcacctgaagctgaatgaccaggcgcagcgcacggtgctgtgcaaggacccgttccgg
tcggtggacgaccgggtggagaagctcatcgccggcatgtga
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