Streptomyces glycanivorans: P8A20_28240
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Entry
P8A20_28240 CDS
T10510
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sgly Streptomyces glycanivorans
Pathway
sgly00040
Pentose and glucuronate interconversions
sgly01100
Metabolic pathways
sgly02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sgly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
P8A20_28240
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
P8A20_28240
Enzymes [BR:
sgly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
P8A20_28240
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
WLQ67228
UniProt:
A0ABY9JL11
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Position
6403548..6404876
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AA seq
442 aa
AA seq
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MPARMRHVRAIAVVMGATSLALAVSVPAQATTHHGRGVERSVLPAGDGWASADGSTTGGA
DATPEHVYTVTNRAELIAAFADAGDAPKIVRIAGTVHGNSDAAGTPIGCEAYQQDGYTLE
KYLAAYDPAVWGTDEVPAGPLEDARAASAKLQAAAVNVNVPSNTTIVGVGRDATVIGASL
QVKNVSNVIVRNISFEDTYDCFPQWDPTDGDQGAWNSEYDNLVVYGSSHVWVDHNTFSDG
DRPDADQPSYFGQIYQQHDGLFDIVRGADLVTVSWNVLKDHDKTMLIGNSDGAGATDRGK
LRVTLHHNLFKDVKERAPRVRFGQVDSYNNHFVATTGAAYGYTYGIGAESKLVAESNAFT
LGSGFDKAKILKKWSESSLTAGNNYVNGRKTDLIAVHNAGVPAEQLTAGAGWTPTLRTEV
SHPLVVPLLVGLGAGAGKPLVR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacgcatgagacacgtccgcgccatcgccgtggtgatgggcgccacctcgctc
gccctcgccgtgagcgtgcccgcccaggccaccacccaccacggcaggggcgtcgagcgc
tccgtgcttcccgccggtgacggctgggcctccgccgacggctccaccacgggcggcgcg
gacgccaccccggagcacgtgtacaccgtcaccaaccgggccgagctcatcgccgccttc
gcggacgccggtgacgcgcccaagatcgtcaggatcgccggtaccgtccacggcaactcc
gacgccgccggcaccccgatcggctgcgaggcctaccagcaggacggctacaccctggag
aagtacctcgccgcctacgacccggccgtctgggggaccgacgaggtcccggcgggcccg
ctggaggacgcacgggccgcgtccgcgaagctgcaggcggcggcggtcaacgtcaacgtc
ccctccaacaccacgatcgtcggcgtcggcagggacgccacggtcatcggcgccagcctc
caggtgaagaacgtctccaacgtcatcgtccgcaacatctcgttcgaggacacctacgac
tgcttcccccagtgggaccccaccgacggtgaccagggtgcctggaactccgagtacgac
aacctcgtcgtctacggctccagccacgtctgggtcgaccacaacaccttcagcgacggt
gaccggcccgacgccgaccagccctcctacttcggccagatctaccagcagcacgacggc
ctcttcgacatcgtgcgtggcgccgacctcgtcaccgtctcgtggaacgtcctcaaggac
cacgacaagacgatgctcatcggtaacagcgacggcgccggcgccaccgaccggggcaag
ctccgcgtcacgctgcaccacaacctcttcaaggacgtgaaggaacgcgcgccccgcgtc
cgcttcggccaggtcgactcctacaacaaccacttcgtcgccacgacgggcgccgcctac
ggctacacctacggcatcggcgccgagtccaagctcgtcgccgagtccaacgcgttcacg
ctcggatccggcttcgacaaggcgaagatcctgaagaagtggtccgagtcctccctcacg
gcggggaacaactacgtcaacggacgcaagaccgacctgatcgccgtccacaacgcgggc
gttcccgccgagcagctcaccgcgggcgccggctggaccccgacgctgcgcaccgaggtc
agccacccgctcgtcgtcccgctcctggtgggcctcggagcgggcgccggaaagccgctg
gtccgctga
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