Streptomyces gobiensis: test1122_01280
Help
Entry
test1122_01280 CDS
T08145
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
sgob
Streptomyces gobiensis
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sgob03051
]
test1122_01280 (pafA)
Enzymes [BR:
sgob01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
test1122_01280 (pafA)
Proteasome [BR:
sgob03051
]
Prokaryotic proteasome
Bacterial regulatory particles
test1122_01280 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
UGY90489
LinkDB
All DBs
Position
complement(260278..261639)
Genome browser
AA seq
453 aa
AA seq
DB search
MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKSGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADVLIPFLVTRQLICGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGQRKVRLASGREASALEVQQEYYEKAVDFCERRGIRTGMV
DRVLELWGRALEAVRTQELDKINTEIDWVMKYQLLERYRAKHNITMSHPRVAQIDLAYHD
IHRRRGLYYLLERNGQAERICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDERVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgaatcttcgggcttgagaacgagtacggcgtcacatgtacgttccggggg
cagcgtcggctgtcccctgacgaggtggcgcggtacctcttccgccgtgtcgtgtcatgg
ggccgcagcagcaatgtctttctgcgcaatggcgcccgtctgtacctcgatgtgggctcg
cacccggagtacgccactccggagtgtgacaacgtgaccgagctggtcacccacgacaag
tcgggcgagcgcatccttgagggccttctggtcgacgctgagcgccgcctgcatgaggag
ggcatcgcgggcgacgtctatctgttcaagaacaacaccgactcggcgggtaactcctat
ggctgccatgagaactatctggtggcgcggcatggggagttctcccggctcgcggatgtg
ctcattccgttcctggtcacccgtcagctcatctgtggtgcgggcaaggtgctgcagact
ccacgcggtgcggtctactgcgtcagtcagcgcgctgagcacatctgggagggcgtcagc
tcggcgacgacccgttcccggcccatcatcaatacccgggatgagccgcacgctgacgcc
gagcgttaccggcggctgcatgtcatcgtcggtgactccaatatgtccgagacgacgatg
ctgctgaaggtcggcgccacggatctggtgctgcgcatgatcgaggcgggcacggtgatg
cgggatctcaccctggagaacccgatccgggccatccgtgaggtcagtcacgacatcacc
ggccagcggaaggtgcggctggccagcggccgggaggcttccgcgctggaggtccagcag
gagtactacgagaaggctgtggacttctgcgagcgccgtggtatccgtacgggcatggtg
gatcgtgtcctggagctgtgggggcgtgctctggaggcggtccgtacccaggagctggac
aagatcaacactgagatcgactgggtcatgaagtaccagctcctggagcggtaccgggcg
aagcacaacatcaccatgtcgcatccgcgggtcgctcagatagatctcgcgtatcacgac
atccaccgtcggcggggtctgtactacctgctggagcgcaatggccaggccgagcggatc
tgcaatgacctcaagatcttcgagggtaagtccgtgcctccgcagaccacccgggcacgg
ctgcggggtgacttcatccgccgggcccaggagcagcggcgtgacttcactgtcgactgg
gtgcatctgaagctcaatgaccaggcgcagcgcacggtgctgtgcaaggacccgttccgg
tcggtggatgagcgggtggagaagctgatcgcggggatgtga
DBGET
integrated database retrieval system
