KEGG   Scandinavium goeteborgense: A8O29_021015
Entry
A8O29_021015      CDS       T06630                                 
Symbol
uvrA
Name
(Genbank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
sgoe  Scandinavium goeteborgense
Pathway
sgoe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sgoe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A8O29_021015 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sgoe03400]
    A8O29_021015 (uvrA)
DNA repair and recombination proteins [BR:sgoe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A8O29_021015 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A8O29_021015 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 DnaJ_CXXCXGXG RsgA_GTPase AAA_25 NACHT Viral_helicase1 T2SSE cobW AAA_21 ExoX-like_C ScfRs DUF3987
Other DBs
NCBI-ProteinID: QKN83654
LinkDB
Position
4235496..4238318
AA seq 940 aa
MDKIEVRGARTHNLKNINIVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPMIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVREDLAQRLAESFETALDLSGGTAIVSEMDDP
KADELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRIIQNPEL
SLAGGAIRGWDRRNFYYFQMLRSLAEHYEFDIEAPWGSLNANVHKVVLYGSGKESIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESNAVREELAKFISNRPCTSCDGTRLNREARH
VFVENTPLPTISDMSIGHAMEFFQNMKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGTLEDIMAVPESLTGQYMSGKRKIEV
PNDRVPADPSKVLKLTGARGNNLKDVTLTVPVGLFTCVTGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDVTGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPVRELFAGVPE
SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVADCEASHTARFLKPLL
NT seq 2823 nt   +upstreamnt  +downstreamnt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaacatcaacatcgtc
atccctcgcgacaaactgattgtcgtgaccgggctttctgggtcaggtaaatcttcgctg
gcgttcgatacgctgtatgccgaaggccagcggcgctacgttgaatcactctccgcctat
gcgcgtcagttcctgtcattgatggaaaaacctgacgttgaccacatcgaagggctgtcg
cccgcgatttctattgagcaaaagtcaacgtctcacaacccgcgttccaccgtcgggacc
atcactgaaatccacgattatctgcgtctgctgtttgcccgcgtgggcgaaccgcgctgc
ccggatcacgatgtgccgctggcggcgcagaccgtcagccagatggtcgataacgtgctg
tcacagcctgaaggcaagcgcctgatgctgctggcgccgatgataaaagagcgtaaaggc
gagcacactaagacgctggaaaacctggcgagccagggttatatccgcgcccgcattgac
ggcgaagtctgcgacctgtccgatccgccaaagcttgagctgcagaaaaagcacactatt
gaagtcgtgattgaccgcttcaaagtgcgcgaagatctggcccagcgcctggccgaatca
tttgaaaccgcgctggatctctccggcggcaccgcgatcgtttcagaaatggacgatccg
aaagccgatgaactgctgttctccgccaacttcgcctgtccgatttgcggctacagcatg
cgtgaactcgaaccgcgtctgttctcgttcaacaacccggccggtgcctgcccaacctgt
gacggcctcggcgtgcagcagtatttcgacccggaccgcatcatccagaacccggagctt
tcccttgccgggggcgcaatccgcggctgggatcgccgtaacttctactatttccagatg
ctgcgctcgctggcggagcattatgaattcgatatcgaagccccgtggggcagcctgaac
gcaaatgtgcataaagtggtgctgtatggttcaggcaaagagtcaattgaattcaaatac
atgaacgaccggggcgatacctccgtgcgccgccatccgttcgaaggcgtgctgcataat
atggagcgccgctacaaagagaccgaatctaacgcggtgcgcgaggagctggcgaaattc
atcagcaaccggccgtgcaccagctgcgacggcactcgtctgaaccgcgaagcgcgccac
gtgtttgtcgaaaacaccccgctgccaaccatttcagacatgagcatcggccatgcgatg
gagttcttccagaacatgaagctgtccgggcaacgcgccaagattgcggaaaaagtgctg
aaagagattggcgatcgcctgaagttcctggtcaacgttggcctgaactatctttccctt
tcccgctcggcggaaaccctctccggcggtgaagcccagcgtattcgtctggctagccaa
attggtgccggtctggtgggtgtgatgtacgtgctggatgaaccgtctatcggcctgcat
cagcgcgataacgaacgcctgctcggcaccctgattcacctgcgtaacctcggtaacacg
gtgattgtggtagagcacgacgaagatgctatccgcgcggctgaccacgtgattgatatc
ggcccgggcgctggcgtccacggcggcgaagtggtggcggaaggtacgctggaagacatt
atggcggtacccgaatcgttgaccggtcagtacatgagtggcaaacgtaaaatcgaagtg
ccgaacgatcgcgttccggctgacccgtcaaaagtgctgaaactgaccggcgcacgcggt
aacaatctgaaagacgtcacgctgacagtacctgttggcctgtttacctgcgtgacgggt
gtatccggttccggtaaatcaacgctgattaacgacacgctgttcccgattgcacagcgc
cagctcaacggcgcgaccatcgccgagcctgcgccgtatcgcgatgtcacgggcctcgag
catttcgacaaagttatcgatatcgaccagagcccgattggccgtacgccgcgctctaac
ccggccacgtacaccggcatctttacgccagtgcgtgaactgttcgcgggcgtgccggaa
tcgcgtgcgcgcggttatacgccggggcgttttagctttaacgtccgtggcggccgctgc
gaagcgtgtcagggcgatggcgtcatcaaggtggaaatgcacttcctgccggatatctac
gtgccgtgcgaccagtgcaaaggcaagcgctataaccgcgaaacgctagagattaagtac
aaaggcaagactatccacgaagtgctggatatgaccattgaagaagcgcgtgagttcttt
gatgccgttccggcgctggcgcgtaaactgcaaacgctgatggatgtgggcctgacctac
attcgtctcggccagtcggcgacaacgctctccggcggtgaagctcagcgcgtgaagtta
gcgcgtgagctgtccaaacgcggtaccgggcagacgctgtatatcctcgatgaaccgacc
actggcctgcattttgccgacatccagcagttgctggacgtgctgcataagctgcgcgat
cagggcaataccatcgtggttatcgagcataatctggacgtgattaaaaccgcggactgg
attgtcgatctcggcccggaaggcggcagcggcggcggggaaattctcgtctccggtacg
ccggaaacggtcgcagactgcgaagcctcgcatactgcgcgcttccttaagccgttgctg
taa

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