Sphaerochaeta pleomorpha: SpiGrapes_0405
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Entry
SpiGrapes_0405 CDS
T01673
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sgp
Sphaerochaeta pleomorpha
Pathway
sgp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SpiGrapes_0405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgp03400
]
SpiGrapes_0405
DNA repair and recombination proteins [BR:
sgp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SpiGrapes_0405
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
AAA_27
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AEV28263
UniProt:
G8QW20
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Position
442322..444931
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AA seq
869 aa
AA seq
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MGEIEKTTPMMMQYRLIKEQNQDKVLFFRLGDFYEMFDTDAVEVSRLLNLTLTKRAGQAM
CGIPYHAAKAYIKRLLDLGKKIAICEQVELNNDPKQLARREVVQVVTPATVVDDDFLDSR
SNSYVLCIAYHRQRFMVSYTDITNGEFTLRSAEMDKQFNALLAIIEQVKPREILVNEDDY
FLHLDFQRIIDAQNAMVTKLPSWFFKAKEGYQLMCDQVGTCSLKAFSLDASSPEVTSGGA
LLRYVIDSAKTALDQIRGYTLADENTFLQIDESSRKNLELLLNLQDGNERYSLFSSIDAS
VTSGGARLLKKWISFPLIDKEKILGRQDWVRRYCDDRLELDRTRTILKGVLDLERLTSRI
AMGRSLPHDLVGIARTVKAFLELVSDSFSLYRPLFGDGFSDEQMHALLEVVQTIDKSLND
QCQGPFMEGQVILDGFDPELDSLRSIKDNGKQILDTYLGKVRTETGITTMKLSSNKILGH
FLEVSKGQVDKVPSSFYRKQTLVNAERYTSDELIACETKILKSSFEAEKRERVLYENILS
ETRELRNQLLSIGNFLSQVDCLQAFATTSIRYNYCCPVFTDSDCLEIEGGRHPVVEQQLG
VGSFVANDLHIKPSGNRFCLITGPNMAGKSTFLRQSALIVLLAQIGSFVPATSARLSLVD
RLYCRVGSSDNLARGESTFLVEMQEAAHILRTASARSLVIMDELGRGTSTQDGMSIAYAV
MQSLLELGPKTLFATHYHELAQLDTSLVQLLTLQVLEKGGEILFVRKVIEGIANSSYGLN
VAKMAGIPNKALRTALSFQKRHFSEYGVANPQLDLFASDSSATEMGGVPILTEVEADVLE
RIKEVDIPSSTPISALLLLEDLKKKLEAD
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgggagagattgaaaagacaacccccatgatgatgcaatatcgccttatcaaggaacaa
aaccaagataaggtgctgtttttccgccttggggatttttatgagatgtttgataccgat
gccgtggaagtctcacgcttgctcaaccttaccttgaccaagcgtgcaggccaggcaatg
tgcggtattccctaccatgcagcaaaggcttatatcaaacggcttcttgaccttgggaaa
aaaattgccatctgcgaacaggttgagttgaataacgatccgaaacagctggccagaagg
gaagtcgtgcaggtggttacccctgcaaccgttgttgatgatgattttctggattcccgg
agcaacagttatgttttatgcatagcctaccatcgccaacggttcatggtaagttatacg
gatataaccaacggtgagtttaccctccgttctgccgaaatggataaacagttcaatgct
ttgcttgcaatcatcgaacaggtaaagcccagagagatcctggtcaacgaggatgattat
tttttgcacttggatttccaacggataatcgatgcacagaatgctatggtaacaaagctg
ccttcctggtttttcaaggccaaggaaggataccagcttatgtgcgatcaagtaggcacc
tgttcattgaaggcattttccctggatgcaagttccccggaagtcaccagcgggggggct
ctgctgcggtatgtcatcgattcggccaagactgctcttgatcagatcaggggatatacc
cttgccgatgagaatacgttcctccagattgatgaatcgagcagaaagaaccttgaattg
ctgttgaacctccaggatggaaacgagcggtattcgcttttttcgtccattgacgctagt
gttaccagcggaggggcacgacttctgaaaaaatggatttcctttcccctcatcgataaa
gaaaaaatcctcggcagacaggactgggtccgtagatattgcgatgaccgcctggaactg
gataggacaaggaccatcctcaagggagtccttgacctcgaacgtcttacaagcaggatt
gccatgggccgttccctgccacatgacctggtaggcattgccagaacagtaaaggctttt
ttggagttggtctcagattccttttccctctatcggcccctctttggcgatgggttctcc
gatgagcagatgcatgcactgcttgaggtggtgcagactatcgacaagtcactgaacgac
caatgtcagggtccctttatggaagggcaggtaatccttgacggattcgacccggaattg
gattccctgcgttccatcaaggacaatggaaaacagatactggatacctatcttggtaaa
gtgcgtaccgagacagggattactaccatgaaattgtcctcgaataaaatccttggtcat
ttcctcgaggtctcgaagggtcaagttgataaagtaccttcttccttttatagaaaacag
acactggtaaacgccgagcgctatacctccgacgagctgatagcctgtgagaccaaaatt
ctgaaaagctcctttgaagcggaaaaacgcgaacgtgtcctgtatgagaatatcctttcg
gaaacccgggagctgagaaaccagctgttatcaatcgggaactttctcagccaggtagac
tgcctgcaggcctttgctaccaccagcatccgctacaattattgctgccctgtttttacc
gattcagactgtctggaaatcgagggaggcaggcacccggttgttgaacagcaactggga
gtcggttcctttgtggccaatgatttgcacattaagccttcaggcaatcgtttttgcctg
ataacaggccccaacatggctggtaaatccacctttctgcgccagagcgcactcattgtc
ctgcttgcccagatcggaagttttgttcctgcaacctcagcccggctttcattggtcgat
aggctctattgcagggtcggttcaagcgacaaccttgccaggggagagtcaacctttctg
gttgaaatgcaggaggcagcccatatcctgagaaccgccagcgcacgttcgcttgtaatc
atggatgaactgggaaggggtacgagcacccaggacgggatgtcgattgcctatgccgtg
atgcaatctttgcttgaattaggccctaagaccctatttgccacccattaccatgaactt
gcccaattggatacatccttggtacagcttttgacccttcaggtgcttgagaagggtggg
gagatactttttgtcaggaaagtcattgagggaatcgcgaacagcagctacgggctgaac
gttgcaaagatggcaggaatcccgaataaggcactgagaactgcattgtctttccaaaag
cggcatttcagcgaatatggtgttgccaacccacagcttgatttgtttgcatcagattct
tcagcaaccgagatgggaggggtaccgatcctcaccgaggttgaagccgatgtactggaa
aggatcaaagaggtggacattccctcttctacgccgatctctgcattattgctgctggag
gatctcaaaaagaaacttgaagcggattag
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