Sporisorium graminicola: EX895_002494
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Entry
EX895_002494 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
sgra
Sporisorium graminicola
Pathway
sgra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EX895_002494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_002494
Enzymes [BR:
sgra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
EX895_002494
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
EX895_002494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clp1
CLP1_P
CLP1_N
AAA_16
AAA_28
Motif
Other DBs
NCBI-GeneID:
40725389
NCBI-ProteinID:
XP_029740491
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Position
SGRAM_15:complement(join(162966..162989,163093..163177,163269..165043))
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AA seq
627 aa
AA seq
DB search
MNGNAEGSAQYRRVFLPPRSEYRFELEPHERLSIRLVQNRLQTGEEPDAEIFGAELVGGS
QERWYPFGDEAKAAVSSWRGAEIEIAGSASTEYLADEPSPVYTAYSNLHLYLERKRILAR
QALRADAKLLSTLAGSVLDPSYIAPRNTDPNTETESDPSGTAASTVYRPEGQGPRVMVLG
PESAGKSSLVKFLANYALRSPAVASLGKGEAGKVAESLRSGRDGIIYPNMEANLSEEAKK
EKREEAKKSDITGWWPVVVNLDPSDGAPPLPCCLSALPLSPLPLASLPSPSPAFAFGTNT
STTGAIPPGTSTAHGVAPLSLWLGRENVRENERHFRRVVDWLAEGVERRLARDFRSRMSG
LIIDTPGVVTADARNKYAFIQHCVKAFKIDTIVVLGHEKLNLEMTKLFGASGETAEIPGS
AGAQRLPQVNVIKLPKSGGVVELDETYRARLKALQVKTYFYGGSSVGSGSTAEGGVPNVV
LPGHADPLGGVPSLSPYSTTIPFDLLEIYRVGQESLAPSSALPIGASRTVTETQLVKMDP
TNSAADQTSLLHSVLALIQPPRGGGGAGQPDSSTNPTDDEIIGAPILGFVHVADIDTVRK
KITVLSPSTGRLPSKTAILGTLDWQDV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaaacgcagaaggatccgcccaatacagacgggtgttcctccctccacgctcc
gagtaccgtttcgagctcgaaccgcacgagcgtctttcgatccgactcgtgcagaaccgc
cttcaaactggcgaggagcccgacgcagagatttttggcgccgagctcgtaggtggctcg
caggaacgatggtacccattcggagatgaagcgaaagctgccgtgtcgtcatggcgagga
gctgagatcgagatcgccggttccgcatccaccgagtatcttgccgatgaaccgtcgccc
gtctacacagcgtattcgaacctccatctgtatctcgagcgcaaacgcattttggcacgt
caagcgctacgcgcagatgccaaattgctctccacgttggctgggtcggtgctggatccg
agctacattgcgccgcgcaacacggacccgaatacagagaccgaatcggatcccagtggc
acggccgcgtcgaccgtgtatcgacccgaggggcagggtccacgagtcatggtgctcggt
cccgaatcggcgggcaagtcgagtttggtgaaattcctggccaactacgcgctgcgctcg
cccgctgtcgctagcttgggcaaaggtgaggcgggcaaagtggccgagagtctacgttcc
ggtagagacggtatcatctatccgaacatggaagccaacttgtcagaggaggcaaagaag
gagaagcgagaagaggcaaagaagagcgacatcactggctggtggcccgtcgttgtcaat
ctcgacccgagcgatggtgcaccgcctctgccctgctgtctgtccgcactgccgctctca
ccgcttccgctggcatcgttgccgtccccctcacccgcctttgcgttcggcacaaacacg
agcaccacgggcgccatcccaccaggcacctcgaccgcccacggcgtcgcgccgctctcg
ctctggctcggccgcgaaaacgtgcgcgaaaacgaacgtcacttccgccgggtggtcgac
tggctcgctgagggggtggagcgccggctggcgcgcgacttccgctcgcgcatgtctggg
ctcatcatcgacacccccggagtcgtcactgcagatgcacgcaacaagtatgcctttatc
cagcactgcgtcaaggcgttcaagatcgatacgatcgttgtgctgggccacgagaagctc
aatctggagatgacgaagctgtttggagccagtggcgagacggcggagattcctggctcg
gcgggtgcgcagaggctgccgcaggtcaacgtgatcaagctgcccaagagtggcggggtg
gtggagctggacgagacgtaccgggcgcggttgaaggcgttgcaggtgaagacgtacttc
tacggcgggtcgagtgtgggcagtgggagtacagcggaggggggagtgccgaacgtggtg
ctgccgggacacgcggatccactgggtggagtgccgtcgctcagcccgtacagcacaacg
atcccgttcgacctgctagagatctaccgagtcggccaggagagtctggcgccctcgtca
gctctgcctataggagcgtcgagaacagtgaccgagacgcagttggtcaagatggacccg
accaactcggcggcggaccagacgagtctgctgcacagtgtgctggcgctcatccagcct
ccacgcggtggaggcggtgcgggtcagccggattcatccaccaatccgacggacgacgag
atcatcggtgctcccatcttgggatttgttcacgtcgcggacatcgatacggtgcgcaag
aagatcaccgtgctttcgccgagtacgggcaggttgccgtccaagactgctattctaggt
actctggactggcaagacgtatag
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