Streptomyces graminofaciens: SGFS_061150
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Entry
SGFS_061150 CDS
T09325
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sgrf
Streptomyces graminofaciens
Pathway
sgrf00040
Pentose and glucuronate interconversions
sgrf01100
Metabolic pathways
sgrf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SGFS_061150
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SGFS_061150
Enzymes [BR:
sgrf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SGFS_061150
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
BBC34821
UniProt:
A0ABN5VNY5
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Position
6920964..6922394
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AA seq
476 aa
AA seq
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MASRSSRRTDSTGTGTSTGTSTGTTTGSAARPTHRRSLRKRRALVAGAAAVAAGVGAGVF
VMNAGASPTADVYHETLAAKDGWASSGTGTTGGTKADAAHTFTVSTRAGLVKALGKATDT
TPRIIKIKGTIDANTDDSGKKLTCADYASGTGYSLAAYLKAYAPSSYGTSKLPSGTQEKV
RAAAQTKQAKNIVFKVPANTTVVGVPGTKAGISGGMLQIQNVDNVIVRNLNFAAAEDCFP
QWDPTDGDDGNWNSNYDSMTLRGATHVWADHNTFTDAPHLDSANPKYFGREYQIHDGALD
ITKSSDLVTVSRNQFTNHDKTMLIGSSDSEPAGKLRVSIHHNIWKGIVQRAPLARVGQVH
IYNNYYDVTTLNGYATQYSINSRAKAQVVAENNYWKVPVGAKLAKLLSGDGTGAIKNSGN
VVNGTACDIVALFNAASSKDLKTTVNWTPALTAGLESSAKNLPKSLATTTGAGVLK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtggcatcccgctcctcgcgccgcaccgacagcaccggcaccggcaccagcaccggcacc
agcaccggcaccacgaccggctccgccgcccgccccacgcaccgccgttcgctccgcaag
cgccgcgccctcgtcgcgggcgccgccgccgtggccgccggagtcggcgccggtgtcttc
gtgatgaacgcgggcgcgtccccgaccgccgacgtgtaccacgagacgctcgccgccaag
gacggctgggcctcctccggcacgggcacgaccggcggcaccaaggccgacgccgcgcac
accttcaccgtctccacccgcgccgggctcgtgaaggcgctgggcaaggcgaccgacacc
accccccggatcatcaagatcaagggcacgatcgacgccaacaccgacgactccggcaag
aagctgacctgcgcggactacgcctccggcaccggctactcgctcgccgcctacctcaag
gcgtacgccccgtcctcgtacggcacctccaagctgccctccggcacccaggagaaggtc
cgcgccgccgctcagaccaagcaggcgaagaacatcgtcttcaaggtgcccgccaacacc
accgtcgtgggcgtgcccggcaccaaggccggtatctccggcggcatgctccagatccag
aacgtggacaacgtcatcgtccgcaacctgaacttcgccgccgccgaggactgcttcccg
cagtgggacccgaccgacggcgacgacggcaactggaactccaactacgactccatgacc
ctgcgcggcgccacccacgtctgggccgaccacaacacgttcaccgacgcgccccacctg
gacagcgccaacccgaagtacttcggccgcgagtaccagatccacgacggcgccctcgac
atcaccaagagctcggacctggtgaccgtctcccgtaaccagttcaccaaccacgacaag
acgatgctgatcggcagcagcgacagcgagcccgccggcaagctgcgcgtctcgatccac
cacaacatctggaagggcatcgtccagcgcgccccgctggcacgagtcggccaggtccac
atctacaacaactactacgacgtcacgacgctcaacggctacgcgacgcagtacagcatc
aactcccgcgccaaggcccaggtcgtcgcggagaacaactactggaaggtcccggtcggc
gcgaagctcgccaagctgctcagcggcgacggcaccggcgccatcaagaacagcggcaac
gtcgtcaacggcacggcatgcgacatcgtggccctgttcaacgccgcgtcctcgaaggac
ctgaagacgaccgtcaactggacgccggccctcaccgcgggcctggagtcgtcggcgaag
aacctgccgaagtccctggcgacaacgacgggcgcgggcgtcctgaagtaa
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