Streptomyces graminofaciens: SGFS_092230
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Entry
SGFS_092230 CDS
T09325
Name
(GenBank) TetR family transcriptional regulator
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
sgrf
Streptomyces graminofaciens
Brite
KEGG Orthology (KO) [BR:
sgrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgrf03000
]
SGFS_092230
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
sgrf01504
]
SGFS_092230
Transcription factors [BR:
sgrf03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SGFS_092230
Antimicrobial resistance genes [BR:
sgrf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
SGFS_092230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_24
HTH_24
Xre-like-HTH
HTH_31
TetR_C_11
HTH_20
TetR_C_43
LacI
DUF6471
HTH_IclR
HTH_3
COR
TrmB
MerR
HTH_7
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
BBC37929
LinkDB
All DBs
Position
10251195..10251773
Genome browser
AA seq
192 aa
AA seq
DB search
MSQMVYGCLMAVDRDHVLRSAAALLTRKSTSTMDEVAKAAGISRATLHRHFAGRDALVRA
LEALGIEECESALDAARLEEGPASDAVRRLVRELEPAAGLLAFLYGEYQLFEGESQNEGW
SRIDARIAALFRRGQESGEFRIDLTPAWLTEAVYGLIASAAWAVLDGRVAAKDFQFMIVE
LLLGGALRREEA
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcagatggtctatggttgtctcatggccgtcgaccgtgaccacgtactgcgcagc
gccgcagccctcctgacccgcaaatccacgtccaccatggacgaggtcgccaaggcggcc
gggatcagccgggccacgctgcaccgccacttcgccgggcgtgacgcgctcgtccgggcg
ctggaggcgctcggtatcgaggagtgcgagtccgccctcgacgcggcgcgtctggaggag
ggaccggcgagcgacgccgtacggcggctcgtccgggagctcgaacccgcggccggactg
ctcgcgttcctctacggcgagtaccagctcttcgagggcgagagccagaacgagggctgg
tcccgcatcgacgcgcgcatcgcggcgctgttccgacgcggccaggagagcggcgagttc
cgcatcgacctcacccccgcctggctcaccgaggcggtgtacggcctcatcgcctccgcc
gcctgggccgtgctcgacggccgggtggcggccaaggacttccagttcatgatcgtcgag
ctgttgctcggcggcgcactacggagagaggaagcatga
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