Streptomyces griseochromogenes: AVL59_44790
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Entry
AVL59_44790 CDS
T04729
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sgs
Streptomyces griseochromogenes
Pathway
sgs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AVL59_44790
09124 Replication and repair
03420 Nucleotide excision repair
AVL59_44790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgs03021
]
AVL59_44790
03400 DNA repair and recombination proteins [BR:
sgs03400
]
AVL59_44790
Enzymes [BR:
sgs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AVL59_44790
Transcription machinery [BR:
sgs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AVL59_44790
DNA repair and recombination proteins [BR:
sgs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AVL59_44790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
IMD
ETAA1
Motif
Other DBs
NCBI-ProteinID:
ANP55780
UniProt:
A0A1B1BAD4
LinkDB
All DBs
Position
10268144..10269787
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AA seq
547 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHERADDCRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVQYSRYPVPHALLVDIAETMDRYGRLTLSKHPAHGLVLTTTDRPVLEEVLK
SKRIAPLVGARIDPDSVVVHPSERGQIKQVLLKLGWPAEDLAGYVDGEAHPIELLEEGWA
LRPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAGSMAQAKSTTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTRKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLILYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAETEEKYRFCATTATKRKVTEAIVRRFAGQQILVIGQYIDQ
LDELGEHLEAPVIKGETSNAQREKLFDAFREGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDA
DEILAED
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggaccgctgatcgtccagtcggacaagaccctgctcctggaggtcgaccacgag
cgggccgacgactgccgtcgggccatcgcgcccttcgccgaactggagcgggctcccgag
cacatccacacctaccgggtcaccccgctgggtctgtggaacgcgcgggcggccgggcac
gacgccgagcaggtcgtggacgcgctcgtgcagtacagccggtatccggtgccgcacgcg
ctcctcgtggacatcgccgagacgatggaccggtacggccggctcaccctcagcaagcac
cccgcgcacggactggtcctgaccaccaccgaccggccggtgctggaggaggtgctgaag
tccaagcggatcgcgccgctggtcggcgcacgtatcgatccggacagcgtcgtcgtgcac
ccctccgagcgcgggcagatcaagcaggtgctgctgaagctgggctggccggccgaggat
ctcgccgggtacgtggacggcgaggcgcacccgatcgagctgctggaggaaggctgggcg
ctcaggccgtaccagaagcaggccgtggagaacttctggcacggcggcagcggtgtggtc
gtactcccctgtggtgccggaaagacgctggtcggcgccgggtccatggcgcaggcgaag
tccaccaccctcatcctcgtcaccaacaccgtctcggcccggcagtggaagcacgagctg
gtgaagcggacctcgctgaccgaggacgagatcggcgagtacagcgggaccaggaaggag
atccgcccggtcaccatcgccacctaccaggtgctgacgaccaagcggaagggcgtctac
ccgcacctggagctgttcgactcccgtgactggggcctgatcctctacgacgaggtgcat
ctccttcccgcgccggtcttcaagttcacggcggacctccaggcccgtcgccgcctcggc
ctcacggccaccctggtccgtgaggacggccgcgagtcggacgtgttctcgctgatcggg
cccaagcggttcgacgcgccctggaaggagatcgaggcgcagggctacatcgcgcccgcc
gactgcgtcgaggtccgggtgaacctgaccgactccgagcggctggcctacgccacggcc
gagaccgaggagaagtaccgcttctgcgccaccaccgcgaccaagcggaaggtcacggag
gcgatcgtccgccgcttcgccgggcagcagatcctcgtcatcggccagtacatcgaccag
ctggacgagctgggcgagcacctcgaagccccggtgatcaagggcgagacgtccaacgcg
cagcgcgagaagctcttcgacgcgttccgcgagggcgagatcagcgtgctcgtcgtctcc
aaggtcgccaacttctccatcgacctgccggaggccacggtcgccatccaggtgtcgggc
accttcggctcccgccaggaggaggcccagcgcctcggccgtgtcctgcgccccaaggcc
gacggccaccaggcccacttctactcggtcgtcgcccgcgacaccatcgaccaggacttc
gccgcccaccgccagcgcttcctggcggaacagggctacgcctaccggatcgtggacgcg
gacgagatcctggcggaggactag
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