Streptomyces griseochromogenes: AVL59_46555
Help
Entry
AVL59_46555 CDS
T04729
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
sgs
Streptomyces griseochromogenes
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgs03021
]
AVL59_46555
Transcription machinery [BR:
sgs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AVL59_46555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
HTH_Crp_2
MarR_2
MarR
HTH_3
DUF134
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ANP56079
UniProt:
A0A1B1BBD2
LinkDB
All DBs
Position
10615561..10616418
Genome browser
AA seq
285 aa
AA seq
DB search
MTVSASTAPPQEEATTPAPTSPAAAPPAPEKRRGADTRALTQVLFAELKELKPGTPEHHR
VRGALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAMPT
VVGEIKRYFRDNVRTVHVPRRLHELWVQVNSATEDLTTAFGRSPSTAEIADRLRISEEEV
LSCIEAGRSYHATSLEAAQEGDGLPGLLDRIGYEDPALDGVEHRDLVRHLLVQLPEREQR
ILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFQRLRSANRIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgtgtcggccagtactgcgccaccccaggaggaggcgaccacccccgcgcccacg
tccccggccgccgcccctccggcccccgagaagcgccgcggcgccgacacccgcgccctc
acccaggtcctcttcgccgagctcaaggagctcaagccgggcacgccggagcaccaccgc
gtgcgcggggcgctcatcgaggccaatctcccgctcgtgcgctacgcggcagcccgcttc
cgctcccgcaacgaaccgatggaggacgtcgtccaggtcggcaccatcggcctgatcaac
gccatcgaccgcttcgacccggaccggggcgtgcagttccccaccttcgccatgccgacc
gtggtcggcgagatcaaacggtacttcagggacaacgtccgcacggtccacgtaccgcgc
cggctgcacgagctgtgggtccaggtgaacagcgcgaccgaggacctcaccacggccttc
gggcgctcgccgtccaccgccgagatcgccgaccggctgcggatcagcgaggaggaggtg
ctctcctgcatcgaggcggggcgctcgtaccacgccacctcgctggaggccgcacaggag
ggcgacgggctgcccggactgctggaccggatcggttacgaggacccggcgctggacggc
gtggagcaccgggatctggtccgccatctcctcgtccaactccccgagcgagaacagaga
atccttcttctgcgctactacagcaatctcacccagtcacagatcagcgcggaactcggt
gtgtcgcagatgcacgtatcgcggctactcgcgcgtagcttccaacggctgcggtccgcg
aatcggatcgaggcataa
DBGET
integrated database retrieval system