KEGG   Streptomyces griseochromogenes: AVL59_46555
Entry
AVL59_46555       CDS       T04729                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03090  RNA polymerase sigma-B factor
Organism
sgs  Streptomyces griseochromogenes
Brite
KEGG Orthology (KO) [BR:sgs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sgs03021]
    AVL59_46555
Transcription machinery [BR:sgs03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AVL59_46555
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 GerE HTH_Crp_2 MarR_2 MarR HTH_3 DUF134 HTH_5
Other DBs
NCBI-ProteinID: ANP56079
UniProt: A0A1B1BBD2
LinkDB
Position
10615561..10616418
AA seq 285 aa
MTVSASTAPPQEEATTPAPTSPAAAPPAPEKRRGADTRALTQVLFAELKELKPGTPEHHR
VRGALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAMPT
VVGEIKRYFRDNVRTVHVPRRLHELWVQVNSATEDLTTAFGRSPSTAEIADRLRISEEEV
LSCIEAGRSYHATSLEAAQEGDGLPGLLDRIGYEDPALDGVEHRDLVRHLLVQLPEREQR
ILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFQRLRSANRIEA
NT seq 858 nt   +upstreamnt  +downstreamnt
ttgaccgtgtcggccagtactgcgccaccccaggaggaggcgaccacccccgcgcccacg
tccccggccgccgcccctccggcccccgagaagcgccgcggcgccgacacccgcgccctc
acccaggtcctcttcgccgagctcaaggagctcaagccgggcacgccggagcaccaccgc
gtgcgcggggcgctcatcgaggccaatctcccgctcgtgcgctacgcggcagcccgcttc
cgctcccgcaacgaaccgatggaggacgtcgtccaggtcggcaccatcggcctgatcaac
gccatcgaccgcttcgacccggaccggggcgtgcagttccccaccttcgccatgccgacc
gtggtcggcgagatcaaacggtacttcagggacaacgtccgcacggtccacgtaccgcgc
cggctgcacgagctgtgggtccaggtgaacagcgcgaccgaggacctcaccacggccttc
gggcgctcgccgtccaccgccgagatcgccgaccggctgcggatcagcgaggaggaggtg
ctctcctgcatcgaggcggggcgctcgtaccacgccacctcgctggaggccgcacaggag
ggcgacgggctgcccggactgctggaccggatcggttacgaggacccggcgctggacggc
gtggagcaccgggatctggtccgccatctcctcgtccaactccccgagcgagaacagaga
atccttcttctgcgctactacagcaatctcacccagtcacagatcagcgcggaactcggt
gtgtcgcagatgcacgtatcgcggctactcgcgcgtagcttccaacggctgcggtccgcg
aatcggatcgaggcataa

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