Streptomyces glaucescens: SGLAU_20035
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Entry
SGLAU_20035 CDS
T03327
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sgu
Streptomyces glaucescens
Pathway
sgu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sgu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SGLAU_20035 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgu03021
]
SGLAU_20035 (rpoB)
03400 DNA repair and recombination proteins [BR:
sgu03400
]
SGLAU_20035 (rpoB)
Enzymes [BR:
sgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SGLAU_20035 (rpoB)
Transcription machinery [BR:
sgu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SGLAU_20035 (rpoB)
DNA repair and recombination proteins [BR:
sgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SGLAU_20035 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AIR99960
UniProt:
A0A089Z2A8
LinkDB
All DBs
Position
4557265..4560750
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRNASTANTNNAASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNDAWKARVEE
ALENGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGTDTPLDAGILTVEDIIATIKYLVKLHAGETETVGDSGETVVVETDDIDHFG
NRRLRSVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFVETPYRKVVDGQVTDEVDYLTADEEDRFVIAQANATLGDDMRF
SEARVLVRRRGGEVDYVSPEDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIQAEAPLVGTGMEYRSAVDAGDVVKAEKAGVVQEVSADYITTANDDGTYITYRLAK
FARSNQGTSVNQKVIVNEGDRVIEGQVLADGPATQNGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVIAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLADEWAQRLQAIGADQVAPGTNVATP
VFDGAREDELAGLLQHTIPNRDGERMVLPSGKARLFDGRSGEPFPDPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaacgcctcgaccgcgaatacgaacaacgctgccagcaccgccccg
ctgcgcatctcctttgcaaagatcaaggagcccctcgaggttccgaaccttctcgcgctc
cagaccgagagcttcgactggctgctcggcaacgacgcgtggaaggctcgcgtcgaggag
gccctcgagaacggtcaggacgtccccaccaagtccggtctggaggagatcttcgaggag
atctccccgatcgaggacttcagcgggtcgatgtcgctgaccttccgcgaccaccgcttc
gagccgccgaagaactccatcgacgagtgcaaggagcgcgacttcacgtacgccgccccg
ctcttcgtcacggccgagttcaccaacaacgagaccggcgagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgaccaacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtggtgtcgcagctggtccgttcgccgggtgtctacttcgactccagcatcgac
aagacgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtccgcatcgaccgcaagcgcaagcag
tccgtgaccgtcctgctcaaggcgctcggctggacgaccgagcagatcctcgaggagttc
ggcgagtacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgtccgggcgagccgcccacccgtgaggccgcg
cagacgctgctcgagaacctctacttcaaccccaagcgctacgacctcgccaaggtcggc
cgctacaaggtcaacaagaagctgggtacggacaccccgctggacgcgggcatcctgacc
gtcgaggacatcatcgcgacgatcaagtacctggtgaagctgcacgccggcgagaccgag
acggtcggcgacagcggcgagacggtcgtcgtcgagacggacgacatcgaccacttcggc
aaccgtcgtctgcgcagcgtcggcgagctcatccagaaccaggtccgcacgggtctggcg
cgtatggagcgagtcgtccgcgagcgcatgacgacgcaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcccagttcatggaccagaacaacccgctgtccgggctgacgcacaagcgtcgt
ctgtccgcgctcggcccgggtggtctctcccgtgagcgggccggcttcgaggtccgcgac
gtgcacccgtcgcactacggccgcatgtgcccgatcgagacccccgaaggcccgaacatc
ggtctgatcggctcgctcgcctcctacggccgcgtcaacgccttcggtttcgtcgagacc
ccgtaccgcaaggtcgtcgacggccaggtcaccgacgaggtggactacctgaccgccgac
gaggaggaccgcttcgtcatcgcgcaggccaacgccacgctcggcgacgacatgcgcttc
tccgaggctcgcgtcctggtccgccgccgtggcggcgaggtcgactacgtcagccccgag
gacgtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatgatc
ccgttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgccag
gccgttccgctcatccaggcggaggccccgctcgtcggcaccggcatggagtaccgctcc
gccgtcgacgccggcgacgtcgtcaaggccgagaaggccggtgtggtccaggaggtctcc
gcggactacatcaccaccgccaacgacgacggcacgtacatcacgtaccgcctggccaag
ttcgcccgctccaaccagggcacctcggtcaaccagaaggtcatcgtcaacgagggcgac
cgcgtcatcgagggccaggtcctcgccgacggcccggccacccagaacggtgagatggcc
ctcggcaagaacctgctcgtggcgttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgcatcggtgcc
gaggtcatcgccggtgacatcctcgtcggcaaggtcacgcccaagggtgagaccgagctg
acgccggaggagcgcctgctgcgcgcgatcttcggtgagaaggcccgtgaggtccgtgac
acctcgctgaaggtgccgcacggcgagaccggcaaggtcatcggcgtgcgcgtcttcgac
cgcgaggagggcgacgagctgcccccgggcgtgaaccagctcgtgcgcgtctacgtcgcc
cagaagcgcaagatcaccgacggtgacaagctcgccggccgccacggcaacaagggtgtc
atctccaagatcctgcccatcgaggacatgccgttcctcgaggacgggaccccggtcgac
atcatcctcaacccgctgggtgtgccgtcccgaatgaacccgggacaggtgctggagatc
cacctcggctggctcgccagccgcggctgggacgtctccggtctcgccgacgagtgggcc
cagcgcctgcaggccatcggcgccgaccaggtcgcccccggcaccaacgtcgcgaccccg
gtcttcgacggtgcccgcgaggacgagctggcgggtctgctgcagcacaccatcccgaac
cgcgacggcgagcgcatggtgctcccgtccggcaaggcgcggctgttcgacggccgcagc
ggtgagccgttcccggacccgatctcggtcggctacatgtacatcctcaagctgcaccac
ctggtcgacgacaagctgcacgcccgctcgaccggcccgtactcgatgatcacccagcag
ccgcttggtggtaaggcccagttcggtggccagcgcttcggtgagatggaggtgtgggcg
ctggaggcgtacggcgccgcgtacgccctccaggagctgctgacgatcaagtccgacgac
gtcaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccctgagccc
ggcatccccgagtccttcaaggtgctcatcaaggagatgcagtccctgtgcctcaacgtg
gaggtgctgtcctcggacggcatgtccatcgagatgcgcgacaccgacgaggacgtcttc
cgcgctgcggaggagctcggtatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
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