Syntrophobotulus glycolicus: Sgly_0002
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Entry
Sgly_0002 CDS
T01429
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
sgy
Syntrophobotulus glycolicus
Pathway
sgy03030
DNA replication
sgy03430
Mismatch repair
sgy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sgly_0002
03430 Mismatch repair
Sgly_0002
03440 Homologous recombination
Sgly_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgy03032
]
Sgly_0002
03400 DNA repair and recombination proteins [BR:
sgy03400
]
Sgly_0002
Enzymes [BR:
sgy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sgly_0002
DNA replication proteins [BR:
sgy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sgly_0002
DNA repair and recombination proteins [BR:
sgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sgly_0002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Nse4_C
GAIN
Motif
Other DBs
NCBI-ProteinID:
ADY54383
UniProt:
F0SUH0
LinkDB
All DBs
Position
1554..2651
Genome browser
AA seq
365 aa
AA seq
DB search
MKIKVTKTDLLTGVNTVQRAVSAKNTLPILQGIKLRAENNTLCFEATDLELGIRSSFDAE
IIEEGTIVLPSRLFSEIVRKLPDSDVVLESTDHITNINYSGSSFTINGYDPEEFPEIGDV
PVEDEIKLPADLFKNMIRQTVFACAAEETRPVFTGLLLHLEEDNLALVGTDTHRLAYRTA
KIPGNKQKFKGIVPAKSMQEIYRLLQDDHDLTIYCSKSRVFFNFGSIQLQARLIDGQFPN
YKQVIPQKCNTKLLINTKNFTDMVERASLLSKDNLIKTGSVRINVENSVLKINQFSEAGK
INEEMKINQDGEDVSISFNSKYVLDLLKIIDSENILMETSGAVNPCIFRPENDQDYLCLV
LPLRN
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaagttacaaaaactgatctcttgactggagtaaatactgttcaaagagcc
gtttcagccaaaaatacacttccgattttgcaaggaatcaaactccgggctgaaaacaat
acgctctgttttgaggcgacggatttagaattaggcattcgcagcagttttgatgcagaa
attattgaagaagggacaatcgttttaccttccagattgttttctgaaatcgttcgaaag
ttgccggatagtgatgtggttttagaatcgactgatcatattacaaatattaattattca
ggatccagctttaccattaatggttatgatccggaagaatttcctgaaataggcgatgtt
cctgttgaggatgaaataaagctgcctgccgacctgtttaaaaatatgatcaggcaaaca
gtgtttgcttgtgctgctgaagagacaaggcctgtttttacagggctccttctccatctg
gaagaagataatctggccttggttggtacagatactcatcgtttagcttatcgtacagcc
aagatacccggcaataagcaaaaatttaaaggtatagttccggcgaaatccatgcaggaa
atctatagattattacaggatgatcatgacttaacgatatattgttccaagtcgcgagta
ttttttaatttcggatcaattcagcttcaagctcgattaattgatgggcagtttcccaat
tataaacaagtcattcctcaaaaatgcaatacgaagttattgatcaataccaagaatttc
acagacatggttgaaagagcttccctgttatcaaaggataatttaattaaaacaggttca
gtaaggataaatgtggaaaactctgtcttgaaaatcaatcagttttcagaagcgggtaaa
atcaatgaagaaatgaagatcaatcaggatggagaagatgtttcgatttcatttaattca
aaatatgttctggatcttttaaaaatcattgatagcgaaaatattttgatggaaacttca
ggtgcggttaatccgtgtatttttagaccggaaaatgatcaggattatttatgcctggtt
ttaccattaagaaattag
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