Strigops habroptila (Kakapo): 115601171
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Entry
115601171 CDS
T08851
Symbol
CNGB1
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
115601171 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115601171 (CNGB1)
Ion channels [BR:
shab04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115601171 (CNGB1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
115601171
NCBI-ProteinID:
XP_030326670
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Position
Z:21942955..21973024
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AA seq
1200 aa
AA seq
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MLSWIERVVPQPPGPHLVEETPLAPAPEQDLEPPRAPTGKAGGLRDAADCTPTKEMDKKV
GFAVPEDQGSVFESVGSSVLSWLSQGLEKVIPQPVLAPGTPQALGKSFKTSIDVPDQTEV
QVLKDEEEEALEIIPFDAEEDKLDNCEPEPDLDTATEEWAGVRVFNWLVQGFERMVPQPE
VLKKLELEPKQHKCEATAGGTKGTKAQAKPNSSISAAQSTPAAVEPAAAEVQPEPVATLI
PRSLAGDGSRVFAWLVQGLEKVMPQPVTREKQEAQGVDAATLSPVEEIHIVAEEPKETDL
ILEEIDGDWSNEATCEMMAWDVKAELVADTHPLPPIQEEPQEEENRLWSCSLSAGEEEEE
MEQDGEEEEEEEGKREEELEESAGPLLLSPCLAAEEDVEEVYFAEEAFRIEQLEEAEISD
LEGAFIQVQHRSLQQQSAGAXQAAGWGTYPTVGIKDVDRRGDAVEDDGTHLPVPTATSNM
LAVPRVAPASPRRKLLAPKDGLEERVSQSPTRALLGCDEKQNESLPERIGSATSLSSTII
NNRLQELVRLFKERTEKVKEKLTDPDITSDEESPTASPAKPALPAAPAPPPGGQPEGEKV
AEEEHYCEMLCCTFKHRPWLDRLRNYQFPSSIDPLTNLMYVLWLFFVVMAWNWNCWLIPV
RWAFPYQTQANIHCWLFIDYLCDLIYLLDILIFQTRLQFVRGGDIISDKKAMKENYLRSQ
RFKMDMVCLLPLDFFYFKVGVNPLLRFPRCLKYMAFFEFNNRLEAILTKAYIYRVIRTTA
YLLYSLHVNSCLYYWASAYEGLGSTTWVYDGEGNSYIRCYYWAVKTLITIGGLPDPKTLF
EIIFQLLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNFYKIPKTVQKR
VKTWYEYTWHSQGMLDESELLVQLPDKMRLDIAIDVNYNIVSKVALFQGCDRQMIFDMLK
RLRSVVYLPNDYVCKKGEIGREMYIIQAGHVQVLGGPDGKTVLVTLKPGSVFGEISLLAA
GGGNRRTANVIAHGFANLFILDKKDLNEILVHYPESQKLLKKKAKKMLKNNNKPKDEKGA
PGDSLIIPPKPDTPKLFRAALAATGRMGGKGPLAQLRWRLRELKAMQATQDSGLSPTPPK
SPVHQRSPVTSHKARTHLGEEIFSKSSDSLVTIRVISTAQEDEEILAAEISEQEDDKKDE
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgctgagctggatcgagcgggtggtcccccagcccccagggccccacctggtggaggag
acccccctggccccagctccagagcaggacctggagccacctagggcaccaacagggaag
gctggtggcctcagggacgctgctgactgcacacccaccaaagaaatggacaagaaggtg
ggatttgcagtccctgaggaccaaggctctgtgtttgagagtgtggggagcagtgtactc
tcctggctctcccagggactggagaaggtgattccccagccagtcctggccccagggacg
ccgcaggcacttgggaagagcttcaagacaagcatcgatgttcccgatcagacggaggtc
caggtcctcaaggatgaggaagaggaagctctggagataatccccttcgatgcagaggag
gacaagctggacaactgtgagcctgagcctgacttggatactgccaccgaggagtgggca
ggagtgcgggtgttcaactggctggtgcagggcttcgagaggatggtgccacagccggag
gtgctgaagaagttggagctggagccgaagcagcacaagtgtgaagcgacagcaggaggc
acaaaaggaactaaagcccaggcaaagccaaacagcagcatttcagctgcccagagcacc
ccagcagcagtggagccagcagcggctgaggtgcagcccgagccggtggccaccctcatc
cctcggtccttggctggggatggcagcagggtgtttgcctggttggtccaggggctggag
aaggtgatgccgcagccagtgaccagggaaaagcaggaggcacagggagtggatgcagca
actttgagtcctgtggaagaaattcatattgtcgctgaggaacccaaggagacagacctc
atcctggaagagatcgatggtgactggagtaacgaagccacgtgtgagatgatggcctgg
gatgtcaaggctgaactggtggcagatactcatccccttccccccatacaggaggaacct
caggaagaagaaaataggctgtggtcgtgctccctgagtgctggtgaggaggaagaggaa
atggagcaggatggggaggaagaggaggaggaggaggggaagagggaggaggagttggag
gagagtgcgggacccctgctgctgtcaccttgtcttgctgctgaggaggatgtggaggaa
gtctactttgcagaggaggccttcaggattgagcagctggaagaagctgagataagtgat
ctcgaaggtgcttttatacaggtacagcatcgctccctacagcagcaatcggctggtgca
tgacaagccgctggctggggtacttaccccactgtgggcatcaaggatgtggacaggaga
ggcgacgcggtggaggacgacgggacccacttaccggtgcccaccgccaccagtaacatg
ctggcggtgcccagagtggctccggcatcccccaggaggaagctactggccccgaaggat
ggtctggaggagagagtgagccagtccccaacccgagcactactgggctgcgatgagaag
cagaatgaaagcctgccagagcgcatcggttcagccacgagcctgagcagcaccatcatc
aacaaccggctccaggagctggtgaggcttttcaaggagaggaccgagaaggtgaaggag
aagctgaccgaccctgatatcacctcagatgaagagagcccgacggcatctcccgccaag
ccagcactgccagcagcgccagcgcctcccccaggagggcagccagagggggagaaggtg
gcagaagaggagcactactgcgagatgctgtgctgcacgttcaagcaccggccctggctg
gaccgcctgagaaactaccagttccccagcagcattgacccgcttaccaatctgatgtac
gtgctgtggttgttcttcgttgtcatggcctggaactggaactgctggttgatccctgtc
cgctgggctttcccctaccagacacaagcaaacatccactgctggctgttcatcgactat
ctctgcgacctcatctatctgctggacatcctcatctttcagacccggctacagttcgtg
cgggggggagatataataagcgataaaaaggccatgaaggagaactacctgcgatcacaa
cgcttcaagatggatatggtgtgcctcctgcccctggatttcttctacttcaaagttggt
gtcaacccacttctgcgctttcctcgctgtctgaagtacatggccttcttcgagttcaac
aaccgcctggaggctatcctgaccaaagcatacatctacagagtgattcggaccacggcc
tatttactatacagcttgcatgtgaactcctgcctctattactgggcatcagcctatgaa
ggactgggctctaccacctgggtctatgacggggaaggaaacagctacatccgctgctac
tactgggcagtcaaaaccctcatcaccattgggggcctgccagaccccaagacactgttc
gagatcatcttccagctgctgaactacttcacaggtgtctttgctttctccgtcatgatc
gggcagatgagagatgtagtcggtgctgctactgcagggcaaacatactatcggagctgc
atggacagtaccattaagtacatgaacttctacaaaatccccaaaactgttcagaaacgg
gtgaaaacgtggtacgagtacacgtggcattcgcaaggcatgctagatgagtcagagctg
ctggtgcagctgccagacaagatgaggctggacatcgctattgatgtgaactacaacatc
gtgagcaaagtggccctcttccagggctgtgacaggcagatgatcttcgacatgctgaag
cggctcagatctgtggtctatctgcccaatgactacgtgtgtaagaagggagaaattggc
cgtgagatgtacattatccaggcgggacatgtgcaggtgctggggggacccgatggcaaa
actgtgctggtgactctgaaacctggatccgtgtttggagaaataagcttgctggcggca
ggagggggcaatcgccgaacagcaaacgtcattgctcatggcttcgccaaccttttcatt
ttggataagaaggatttgaacgagattttggtgcattatccggagtctcagaagctgctg
aagaagaaggccaagaaaatgctgaaaaacaacaataaacccaaagatgagaaaggagcc
cctggagactctctgataatcccccccaaacctgacaccccgaagctcttccgggctgct
ctggctgccacagggagaatgggcggcaaagggcctctggcacagctccgctggaggctg
agggagctgaaggcaatgcaggcaacacaggattccggattaagtccaaccccaccaaaa
tcaccagtgcaccagaggtcacctgtcacctcccacaaagcacgcacccacctgggagaa
gaaatattctctaaatcttctgatagtttagtcactattcgtgtgatttccacagcacaa
gaagatgaagagatccttgctgctgagatttcggagcaagaagatgacaaaaaagatgaa
tga
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