Strigops habroptila (Kakapo): 115601238
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Entry
115601238 CDS
T08851
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115601238 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115601238 (TTC37)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
115601238 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
TPR_14
TPR_16
TPR_8
TPR_17
TPR_12
TPR_CcmH_CycH
TPR_11
TPR_9
ANAPC3
TPR_15
ARM_TT21_C
HAT_Syf1_M
TPR_30
BTAD
Fis1_TPR_C
Retrotran_gag_2
TPR_20
Motif
Other DBs
NCBI-GeneID:
115601238
NCBI-ProteinID:
XP_030326791
LinkDB
All DBs
Position
Z:23826094..23876742
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSAREAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGVAAAELEQPDQAK
GAYEKAVELEPNQLLAWQGLANLYEKSNQTDVKGDLADVYQKLLELYGSGDKQKWCDVCN
KLVELYHQEKKYLEAAEAWQKLIKMKQKEGAENAELHQLWKKMIQLLKDSTQYQDKKTEQ
LLLTAFEHALNSFDTIPGEDHQNLYKDFIQCLSKFPREAARLEKACNDMMALYPSVSYPL
EVLCLHFVQSGTLSEESLCCFSRLLEMDPSSGPGIIGFGVKSLQEKKYKEAVNSLTEGLQ
KTSQCPAAWHYLADAQMKLHKHKDAVLSCNQALKALGTSEGPSLRWKNLMLLLKAEALIK
ITDANAAEEAIRAIEQIVDASSNPVVLAIRGQAYLKKGLMNQASKISQELLLSHPDVAES
HALEGFIHYSEKNYEQAERSFLNAIERKAETAEYHQYLGLTYWFMSDETRKDKGKALTQF
LKAAKLDSNLGSVFRYLGNYYRDVAGDKSRARGCYKKAFELDGTDEESGTGAVDLSVELG
DMDTALSILNEVTERASPGTAKWAWLHRGLYYLRTDQPSQAVADLQAAVRADPKDSNCWE
SLGEAYLNRGSYSTALKSFRKASELNPGLVYSIYKAAAVEHILGKYENAIATYQQILKDT
EDYVPALKGLGECYLSLARSALDNFFDGKAMDYIEQALEFFTRATKQRPDVSCLWKLLGD
SCTSVHVFSPAKVNIKVLGSLLGKNAATQRLNKSELLILGGRCYGRALKLMPLPSIWCDL
GINYYRQAEHLTAVESDMNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEKINVVAWTNLGVLYLTTGNVEQAHEAFKIAQSLEPSYLLCWIGQA
FIAETVDSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKSNRNTELYLYNIVQMNAI
PAAQVVLSKYTERNPDDASAFTMLGYLNEYLNLKRQATDAYERAASLLKNSGDTERYNIA
MQNCGRCLCALGECDKAIEVYTSIPLTKFDGIVGIALAYFKKGLLQESIKAYEKALSVAE
SEEDKAHILTALAIIEYKQNKVDAAKTLLFKCSLKEPSMESLMALCTLGLVKEDATLATA
ALKELLKHEKGKYKIYERCLIASAVYALQGRNVGVQREISKAIHSNPDNPALWSLLSRLV
PLYVPQKAKGGAVAGNVAHVLDVNHAKEVLVNIAVNQLTAGHHMLEDEKNNPLKNVQKAI
HLYPDNPAAWAVLMAACHAENTVVCLNNTQPKRMDLEMTLLSTVLAKTGENNLPCHYVQT
LEDWCLCQAITSLEETGKLSEAEALCTKGLKSCPEHPALFLLLRQIQCKQLLQSHKELPD
NILEELRKTVMTSSTSVAAWQWLANVYQSQRMMVGAEMCYRKSLQLASQQGSWNGKLSSL
LRLAMLALEICMANVSNEHWPSLVQEATTEALKLSSCPLAALLQALLQYNRKMGARETRR
MLERVVYQPGNPETIVSVARWYLLQHLYAKDDQELIDMLIENAKANGDVRALELNEKLSA
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagcattaaagagtgctagagaagcaatacgaaataaa
gaatataaagaagccttaaaacattgcaaggcagtcttgaagcaagaaaaaaataactac
aatgcttgggtatttattggtgtggcagctgccgagttagaacagcctgatcaggccaaa
ggagcatatgagaaggctgttgaacttgaaccgaaccagttactggcatggcagggatta
gcaaatttatatgagaaatccaaccaaacagatgtcaaaggagacctagcagatgtttac
caaaagctcttggaactctatggaagtggtgacaagcagaaatggtgtgatgtatgtaac
aagcttgtggagctgtatcatcaggaaaagaaatacttagaggctgctgaagcgtggcag
aaactaataaaaatgaagcagaaggaaggtgcagaaaatgcagagcttcatcagctttgg
aaaaagatgatccagttactgaaagacagtacacaataccaggataagaagactgagcag
ttgcttttgactgcatttgaacatgctctgaactcttttgacaccattcctggtgaagac
caccaaaacctttacaaggacttcattcagtgcttgtcaaaatttcctcgtgaagcagct
aggttggaaaaagcctgtaatgatatgatggctttgtacccttctgtgagttatccttta
gaagtactttgcttgcattttgttcagtcaggtactttgtcagaagagtccctgtgctgt
ttttctagacttttggagatggacccaagtagtggtccaggcatcattggttttggtgta
aaaagcctccaagaaaagaaatacaaggaagctgttaacagtcttactgaaggtttgcag
aagacaagccagtgtccagcagcatggcattatttggcagatgcacagatgaaacttcac
aagcacaaagatgctgtcctgtcctgcaatcaagctctcaaggctcttggaacttctgag
ggccctagtcttcgctggaagaaccttatgctcctgttgaaagcagaggctttgattaaa
ataactgatgccaatgctgcagaagaagccattagagcaattgagcagattgtggatgca
agcagtaatcccgtggttttagctatcagaggtcaggcttatctaaagaaaggtttaatg
aatcaagcttcaaagatttcacaagagcttctgttgtcccaccctgacgtggctgagtca
catgctctagagggtttcatccattattccgaaaagaactatgaacaggcagaaagaagt
tttctaaatgctattgaaagaaaggctgaaactgcagagtatcatcagtacctggggctc
acgtactggttcatgagtgatgagacaagaaaagacaaaggaaaagcactcactcagttc
ttgaaggctgcaaaattggacagcaacttgggaagtgtctttcgttatttaggtaactac
tacagagacgttgctggagacaaaagtagagctcgtggttgctataaaaaggcttttgaa
ctggatggaaccgatgaggaatctggaacaggagctgtagacttaagtgtggaacttgga
gacatggacactgctctgtcaatcctgaatgaggtaactgaaagagcaagtcctggtaca
gcaaaatgggcctggcttcatcgtggactttactacctgagaactgatcagccgtcacaa
gcagtggctgatttgcaggcagctgtcagggctgatccgaaggattccaactgctgggag
tctctaggggaggcttatttgaacagaggtagctattcaacagctctaaaatccttcagg
aaagcaagtgagctgaacccagggcttgtgtacagcatttacaaagctgcagcagttgag
cacattctaggcaaatacgaaaatgctatagcgacctatcagcaaatcttaaaggataca
gaagattatgtgcctgcactgaaaggacttggtgaatgctatctgagcttggcaagatca
gcccttgataacttttttgatggaaaggctatggattacatagagcaggctcttgaattt
tttacaagggcaacaaagcaacgtcctgatgtatcttgcctctggaaactgctcggagat
agctgtactagcgtgcatgttttttcaccagccaaagtgaatattaaagttctaggatcc
cttctgggtaaaaatgcagccacacagaggctgaacaaaagtgagctgctcatactggga
ggaaggtgttatggcagagctttaaaactgatgcctttgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcagagcacctcacagcagtggaatctgacatgaatgag
atcagtgaactgctagagaagtctttacagtgtctcaaaaaagctgtgaggcttgacagc
aaaaatcatctttattggaatgcacttggtgtggttgcatcctgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagaaaattaatgttgtt
gcctggaccaacttgggggttttgtatctgacaactggaaacgttgagcaagctcatgaa
gcgttcaagatagcacagtctctggagccttcttatttattgtgttggattgggcaggct
tttattgcagagacagtagacagctatgatactatggatctcttcaggcacacaactgaa
ctcagtatgcatactgaaggagcaaaaggctatgcccactgggtatgttcaacgctgcag
gataaaagcaacagaaacactgaactgtatctgtacaacattgttcagatgaatgctatt
ccagcagcccaggtggtcttgagcaaatatacagaaagaaatccagacgatgcatccgct
ttcacaatgcttggttatttgaatgagtatctgaatctaaaaaggcaggcaacagatgct
tacgagagggcagcttcattgctgaaaaattctggcgatactgagagatataacatagca
atgcaaaactgtggcaggtgtctgtgtgcccttggtgagtgtgataaggccattgaggtt
tatacatcaatacccttaacaaagtttgatggcattgtggggatagcattagcctacttc
aagaaaggactcttacaagaaagtatcaaagcctatgaaaaagccttgtctgttgctgag
tcagaagaagataaagcacatatcttgactgccttggcaataatagagtacaaacagaat
aaagtggatgctgcaaagacactgctatttaaatgctcattaaaggaacctagtatggaa
agtctgatggctttgtgcacactaggacttgtaaaggaggatgctacacttgcaacagca
gccctaaaagaattactgaagcatgaaaaaggaaaatataagatctatgagaggtgcctt
attgcatctgctgtttatgcattgcaaggcagaaatgtgggagtccagagagaaatctcc
aaagcaatacacagtaaccctgataatcctgccctctggtctcttctgtctcggctagtt
ccactgtatgtgccacaaaaggcaaaagggggagctgtagcaggaaatgttgcacatgta
cttgatgtaaaccatgcaaaggaagtcctggtgaacattgcagttaatcagttgacagca
ggacatcacatgttagaagatgagaaaaacaatcctctgaaaaatgtacagaaggcaatc
cacctctatccagataatcctgctgcctgggcagtgctcatggcagcctgtcatgctgaa
aacaccgttgtctgtctaaacaacactcagccaaagcgaatggatctagagatgacactt
ttatctacagttttagccaaaactggagaaaataaccttccatgtcattatgtccagact
cttgaagactggtgtctgtgtcaagccattaccagtctggaggagaccggtaaactctca
gaagctgaagccctttgtaccaagggtttaaaaagctgccctgagcacccagctctgttt
ttgcttttgagacaaattcagtgtaagcagctgttgcagtctcacaaagaacttccagac
aacatcctggaggagcttcgcaagacggtcatgaccagttcaacttcagttgcagcctgg
caatggctcgcaaatgtgtatcagtctcaacgaatgatggttggagcagagatgtgttac
agaaagagtctgcagttggcatcacagcagggcagctggaacgggaagttatccagtctg
ctcaggctagctatgctcgcactggaaatctgcatggctaatgtctcaaatgagcactgg
ccatccttggttcaggaggcaacaactgaagctttgaaactttcttcttgtcccctggca
gctctcctgcaagcgctgctgcaatataatcgcaaaatgggagcaagggagactcgtcga
atgttggagagagtggtttatcagcctgggaatccggaaaccatagtgtcagtggcacgc
tggtacctcctgcaacatctgtatgccaaagatgatcaagaattaatagatatgcttata
gaaaatgccaaagccaacggagatgttagagctctggaactaaatgagaaattgtcagca
agtgcctag
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integrated database retrieval system
