Strigops habroptila (Kakapo): 115603469
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Entry
115603469 CDS
T08851
Symbol
PHF1
Name
(RefSeq) PHD finger protein 1
KO
K11467
PHD finger protein 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115603469 (PHF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115603469 (PHF1)
03036 Chromosome and associated proteins [BR:
shab03036
]
115603469 (PHF1)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
115603469 (PHF1)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
115603469 (PHF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_2
PHD_ash2p_like
Zn_ribbon_4
DUF4537
Prok-RING_1
ASH2L-like_WH
C1_1
Motif
Other DBs
NCBI-GeneID:
115603469
NCBI-ProteinID:
XP_030331234
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MATEPGPPQPRPPRCPPRFWEGQDVLARWTDGLLYLGTIKKVDPGRRGCLVQFEDNSQFL
VLWKDISPAAVPGEDQSCCVCSSRALNPQNLLVRCSKCGHAYHQQCHHPAALPGGPWMCR
RCVFAVATKRGGALKKGPHAKAMLSMKVVLPYQLKALEWDPPHLANRQQCYCYCGGPGEW
NLKMLQCRGCSQWFHEACTQCLSKPLLYGDRFYVFECCVCTGGAESVRRLPLRWVDVAHL
LLYHLSVCCKKKYFDLEREILPFANANWDALLLGQLAETPKGERYGLLLGALSAHKDRFI
SGREIKKRKGLFGLHNRDPPPGAPHFYGGVPTRSQHPPLPPRHQGPPKLSTIRRVSYSPP
PAQHKGGSRRRPPPRRTQGPPGGSYNFRRTEARCPPSAPIRMFASFHPSANTAPSLSSSP
DPESSDSPEPRPPRRNPAPSAPPTRVLARRVTLDGTVQYLVEWGGGGML
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgaaccggggcccccccaaccgcgccccccccgctgccccccccgtttttgg
gagggtcaggacgtcctggctcgctggaccgacggcctcctctacctgggcaccatcaaa
aaggtcgatcccggccgccggggctgcctggtccaattcgaggacaattcccaattcctt
gtcttatggaaggacatcagcccagccgctgtcccaggcgaggatcaatcctgttgcgtc
tgctccagccgagccctgaacccccaaaacctcttggttcgctgctccaaatgcggccat
gcctaccaccagcaatgccaccacccggccgcgctcccgggggggccctggatgtgccgt
cgctgtgtcttcgccgtggccaccaaaagagggggggccctcaagaagggtccccatgcc
aaagcgatgctcagcatgaaggtggtgctgccctatcagttgaaggcgttggaatgggac
cccccccacctcgccaatcgccagcagtgttattgctattgtggggggcccggagagtgg
aacctgaagatgctccagtgccgaggatgctcccaatggttccatgaagcttgtacccaa
tgtctgagcaaacctctgctctacggcgaccggttctatgtcttcgagtgctgcgtctgc
accgggggggctgagagtgtccggaggctgccgctgcggtgggtggacgtcgcccatctc
ctcctctaccacctgagtgtgtgctgcaagaagaagtacttcgacctggagcgggagatc
ctgcccttcgccaatgccaattgggatgcgctgctgctgggccagctggcggagaccccc
aaaggggagcgctatgggctgctgctgggggcgctcagcgcccataaggacaggttcatc
tcgggtcgggagatcaagaagcgcaaaggcctctttgggctccacaaccgggaccccccc
cccggtgccccccacttctatgggggggtccccaccagatcccagcacccccccctccct
ccccgacaccagggcccccccaaactgagcaccataaggagggtctcttacagccccccc
ccagcacagcataaaggggggtcccgccggagaccccccccgcgccggacccagggaccc
cccggtggctcctacaacttcagaaggaccgaggcgcggtgcccccccagcgcccccatc
cggatgttcgcctccttccacccatcggccaacacggccccaagcctcagctccagcccg
gaccccgaaagcagcgacagccccgagccccgccccccgcgccgcaaccccgccccctcc
gccccccccacgcgggtcctggcgcgccgcgtgaccctcgacggcaccgtccaatacctg
gtggagtggggggggggagggatgctctaa
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