Strigops habroptila (Kakapo): 115609095
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Entry
115609095 CDS
T08851
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115609095 (SCN2A)
Ion channels [BR:
shab04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
115609095 (SCN2A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQCJ-SCHIP1
IQ
ATP-synt_B
Neur_chan_memb
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
115609095
NCBI-ProteinID:
XP_030344673
LinkDB
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Position
5:complement(21965082..22044269)
Genome browser
AA seq
2018 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRVNEEKAKKSKQERKDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVISYFNSSI
GENGTFINMTMTTFNWDEYIEDRSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAAADSRDYSGVGGI
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQSEGEEKDGEEFHKSESEDSIKRKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHS
TFEDNESRRDSLFVPHRHGERRNSNISQASRSSRTVAPLPANGKMHSTVDCNGVVSLVGG
PPALTSPTGQLLPEVMIDKAATASNGTTTETDLRKRRSSSYHAPMDYLTDPSARQRAMSI
ASMLTNTMEELEESRQKCPPCWYKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITI
CIVLNTLFMAMEHYPMTEQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFD
GFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLV
LAIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETM
WDCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAV
ARIQKGIDYVKRKVREFIQKAFVRKQKVLDEIKPLEDLNNKKDSCISNHTIVEIGKNLAY
LKEGNGTTSGIGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESD
LEESKEKLNASSSSEGSTVDIGLPPEGEQPEAEPEEVLEPEACFTEGCVRRFKCCQVSVE
DGKGKIWWNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADK
VFTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRT
LRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCV
NTTTDERFDISQINNYSQCEELIKNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDI
MYAAVDSRNVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVT
MMVETDDQSEDMENILYWINLVFIVLFTGEFVLKLISLRHYYFTVGWNIFDFVVVILSIV
GMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSG
EPDCDPYKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESA
EPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMV
SGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEV
SAVIIQRAYRRHLLRQKVKKVSCIFNQDKGKDEDNLPMKGDMIMDKLNENSTPEKTDMTP
STTSPPSYDSVTKPDKDKYEKDKSEKEDKGKDSRENKK
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacctgacagcttccgctatttcacaagagaa
tcacttgcagctattgagcagcgtgtcaatgaggaaaaagctaaaaaatccaaacaagaa
cgcaaagatgatgatgatgaagatggcccaaagccaaatagcgacttggaggcaggaaag
acactgccatttatttacggcgacatacctccagggatggtgtctgagcccttggaagac
ctggacccatattatatcaataaaaaaacctttatagtattgaataaagggaaggcaata
ttccgtttcagtgccacctctgccctgtacatgttaactcctttcaaccctcttagaaaa
atagctattaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagaatac
acattcactggaatttatacctttgaatcacttattaaaattcttgcaaggggcttctgt
ttagaagattttacatttcttcgagacccatggaactggctagatttcactgtcattaca
tttgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaattccaggcttgaagacaatcgtgggcgcc
ctaattcagtctgtgaagaagctctcagatgttatgatcctgactgtattttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagacaattctacatttgaaacaactgttatttcctactttaatagctctata
ggtgaaaatggcacatttattaatatgacaatgacaacatttaactgggatgagtacatc
gaagacagaagtcatttctacttcttggaaggccaaaatgatgctttgctgtgtggcaat
agctcagatgcaggtcaatgtccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgacactacgtgctgctgggaaaaca
tacatgatattttttgttttggtcattttcctgggttctttctacctgattaacttgatc
ctggctgtggttgccatggcctacgaagaacagaatcaagcaaccatggaagaagcagaa
cagaaagaagcagaatttcagcaaatgctggaacaactgaaaaagcaacaggaagaagct
caggcagcagcagcagctgcagcagctgactcaagagattatagtggagtaggtggaata
ggtggattctccgaaagttcttcagaggcatcaaaactgagctcaaaaagtgctaaagag
agaaggaatagaagaaagaaaaaaaagcaaaaagaacaatctgaaggcgaggagaaggat
ggggaagaatttcacaaatctgaatcagaggacagcatcaaaaggaaaggtttccgattt
tccattgaggggaatagactgacatacgaaaagagattctcttccccacaccagtctttg
ctgagcattcgaggctccctgttttctccaaggcgcaacagcagaacaagccttttcagc
ttcagaggtcgagcaaaggacgtaggatcagaaaatgactttgctgatgatgagcacagc
acttttgaagacaatgagagcagaagagattctctctttgttcctcatagacatggtgaa
cggcgcaacagtaacattagccaggccagcaggtcatccaggacagtagctccacttcca
gcgaatgggaagatgcacagcactgtggattgcaatggagtagtttctttagtcggtggg
ccaccagctttgacgtcacctactggacagcttctgccagaggtgatgattgataaagca
gccactgctagcaatggcacgactacagaaactgatttaagaaagagacggtctagttct
tatcatgctcctatggactacttaacagatcctagtgcaaggcaaagagccatgagtata
gccagcatgcttacaaacacaatggaagaattggaagaatccagacagaaatgcccacca
tgctggtataaatttgctaacacttgcttgatttgggactgctgtactccctggctgaaa
gtgaaacatattgtaaatttgattgtgatggacccatttgttgatctggctattactatc
tgcattgtcctaaacaccctattcatggcaatggagcactatccaatgacagaacaattt
agtggtgtgctttcagtaggaaaccttgtgtttactggaattttcacagcagaaatgttt
ctcaagataattgccatggatccttattattatttccaggagggctggaatatttttgat
ggttttattgtgagtcttagtttaatggagcttggccttgcaaatgtagaaggattatct
gtccttcgatcattccgattgcttcgagttttcaaattggcaaaatcttggcccactcta
aatatgctgattaagattattggcaactcagtgggggctctggggaatctgacgctggtg
ctggccatcattgtgttcatttttgctgtggttgggatgcagctgtttgggaaaagctac
aaggaatgtgtctgcaagatctccagtgactgtgaacttccacgctggcacatgcatgat
tttttccactctttcctgattgtattccgagtgctgtgtggagaatggatagaaacgatg
tgggactgcatggaggttgcaggccaaactatgtgccttactgtcttcatgatggtcatg
gtgattggaaatcttgtggtactcaacctctttttggccttgctgctgagctcatttagt
tcagacaaccttgctgctacagatgatgataacgaaatgaacaatctacagattgctgtg
gcaaggatacagaaaggcatagattatgtgaagagaaaagtgcgtgaatttatccaaaaa
gcctttgttagaaagcagaaagttttagatgaaatcaagcctcttgaagacctaaacaac
aaaaaagacagctgtatttccaaccacacaatagtagaaataggtaaaaaccttgcctat
cttaaagaggggaatggaactaccagtggcataggcagcagcgtggaaaaatatgttgtt
gatgaaagtgattacatgtcattcataaacaacccaagcctcactgtgacagtgccaatt
gctgtcggggaatcagattttgaaaatttaaatacagaggagttcagcagcgagtcagac
ctggaagaaagcaaagagaaattaaatgcatccagttcatcagaaggcagcacagttgat
atcggactacctccagaaggggaacagccagaagcagaacccgaagaagttctggagcca
gaggcttgttttacagaaggctgtgtgcggagattcaaatgctgtcaagtcagtgtagaa
gatgggaaagggaaaatctggtggaatcttaggaaaacctgctataagattgttgaacac
aactggtttgagaccttcattgtcttcatgattcttctcagcagcggtgctctggcattt
gaagatatatacatagagcaacgtaaaactatcaaaaccatgctggaatatgctgacaaa
gtttttacttacatcttcattctggaaatgcttttaaagtgggtggcttatggctttcaa
acctatttcactaatgcgtggtgctggctggacttcctgattgttgatgtctctttggtt
agcttaacagctaatgccttgggctactcagaacttggtgcgattaaatcccttaggaca
ctaagagctttgagacctctaagagccttgtcgcgatttgaagggatgagggtggttgta
aatgccctgttaggagcaattccatccattatgaatgtgcttcttgtttgccttatattc
tggctgatcttcagtatcatgggagtaaatctatttgctggaaaattttactactgtgtt
aacactacaactgatgagaggttcgatatcagccaaatcaacaattatagtcaatgtgag
gagctcataaaaaacaatgaaactgcccgatggaagaatgtgaaggttaactttgataat
gtaggccttggttatctttctctgcttcaagtggctacatttaaaggatggatggatatc
atgtacgcagctgtggattctcgtaatgttttggatcagcctaagtatgaagataacctg
tacatgtatctttactttgttatctttatcatctttggatcattctttaccttgaacctt
ttcattggtgtcatcatagacaatttcaaccagcagaaaaagaagtttggaggtcaagac
atttttatgacagaagaacagaagaaatactacaatgcaatgaaaaaattgggttcaaag
aaaccacaaaagccaatacctcgaccagcaaacaaattccaaggcatggtctttgatttt
gtaacaaaacaagcgtttgatatcagtatcatgatacttatctgccttaacatggtcaca
atgatggtagaaacagatgatcagagtgaagacatggaaaacattctatattggattaac
ctggtgtttattgtacttttcactggagaatttgtcctgaaattgatttcacttcgccat
tactactttactgtaggctggaatatttttgattttgtggttgtcattctctcgatagta
ggtatgttcttagctgagatgattgaaaagtattttgtgtccccaacgctattcagagtc
atccgacttgccagaattggccgaatcctgcgtctcattaaaggcgctaagggaatccgc
actctgctttttgctttgatgatgtctcttcctgctttgttcaacattggtctgctgctg
ttcctggtcatgtttatctatgcgatatttggaatgtccaactttgcctatgttaagagg
gaagttgggattgatgatatgttcaactttgaaacgtttggcaacagcatgatctgcctg
tttcaaattactacatctgcaggctgggatggtttgctagctccaattcttaacagtggg
gaaccagactgtgatccctataaagaccatccagggagctccgttaagggtgactgtggc
aacccttctgttgggattttcttctttgtcagctacattatcatatcatttctggtagtg
gtgaacatgtacattgctgtgattttggagaacttcagtgttgctactgaagaaagcgct
gaacccttgagtgaggatgactttgagatgttctacgaagtctgggagaagtttgatccc
gatgccacacaattcatagagttcagtaagctgtcagattttgcagcttcgttagatcct
cctcttctcatagcaaagccaaacaaagtccagcttattgcaatggatctgcccatggta
agcggcgacagaattcactgccttgacatcttgtttgctttcacgaagcgtgttttgggg
gaaagtggggagatggacgccctcagaatacagatggaagatcggtttatggcagccaat
ccttctaaagtctcatatgaaccaattacaaccacattaaaacgaaaacaggaggaggta
tctgctgtcattattcagcgtgcttacagacgtcatcttttaaggcaaaaagtcaaaaag
gtttcatgtatatttaatcaggataaaggtaaagatgaggacaatctgcccatgaaagga
gatatgattatggataaactaaatgagaactctactccagaaaaaacagatatgacccca
tccacaacctccccaccatcctatgatagtgtaacaaagccagacaaggataaatatgaa
aaagacaaatcagaaaaagaagataaaggtaaagacagcagggaaaataaaaagtaa
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integrated database retrieval system
