Strigops habroptila (Kakapo): 115609097
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Entry
115609097 CDS
T08851
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115609097
Ion channels [BR:
shab04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
115609097
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQCJ-SCHIP1
IQ
ATP-synt_B
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
115609097
NCBI-ProteinID:
XP_030344684
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Position
5:22053332..22125827
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AA seq
2011 aa
AA seq
DB search
MAQALLVPPGPESFRYFTRDSLTAIEKRCAEEKAKKPKQEHTDDDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPIRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINVISYFNSTI
NENGTLINMTVSTFNWKDYIEDETHFYTLEGQRDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQATAAVAAASVASRDFSGVG
GLGELLESSSEASKLSSKSAKERRNRRKKRRQKEMSEAEDKGDIDKFPKSESEDSIRRKS
FRFSTEGNQLTYEKRFTSPHQSLLSIRGSLFSPRRNSKTSIFSFRGHAKDVGSENDFADD
EHSTLEDNESRRDSLFVPNRHGERRNSNISQASVSSRMVPALPVNGKMHSTVDCNGVVSL
VGGPSPLTSPAGQLVPEGTTTETEIRKRRLSSYQISMEMLEDSAARQRAMSIASILTNTM
EELEESRQKCPPCWYRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLF
MAMEHHPMTEQFSSVLSVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSL
MELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QTMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGID
YVKKKIQEFIQKAFIRKQKALEEIKALEELNNKKGSCISNHTAVEISKDMNYLKDGNGTT
SGVGTGSSVEKCVIDENDYMSFINNPGLTVTVPIAVGESDFENLNTEEFSSESDMEESKQ
KLNASSSSEGSTVDIAPPGEGEQAEIESEEALEPEACFTEGCVKKFPCCQVSIEDGKGKI
WWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIF
ILEMLLKWVAYGFQIYFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRP
LRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGE
MFDVSDVNNYTQCEELIKNNQSARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVD
SRDVKDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPVNKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETD
DQSKEMETILSRINLVFIILFTGECVLKLISLRHYYFTLGWNIFDFVVVILSIVGMFLAE
MIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFI
YAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDP
HKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSED
DFEMFYEVWEKFDPDATQFIEYSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIH
CLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSAVIIQ
RAYRHYLLRQKVKQVSSIYNRNKNKEGDGPVIKEIIIDKLNGNSTPEKTDESSSTTSPPS
YDSVTKPEKEKYEKDKAEKNYKGKDVREHKK
NT seq
6036 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcactgctggtaccaccaggacctgaaagtttccgctattttactagagat
tctctcacagctattgagaagcgttgtgcagaagagaaagctaaaaagcccaagcaagaa
cacacagatgatgatgacgaaaatggtccaaaaccaaacagtgacttggaggcaggaaag
acactgccatttatttacggtgacatacctccaggaatggtgtctgaacctttggaagac
ctggacccatattatatcaataaaaaaactttcatagtattgaataaaggaaaggcaatt
ttccgattcagtgccacatctgccttgtacattttaactcccttcaatcccatcagaaaa
attgccatcaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagagtac
actttcactggaatttatacctttgaatcacttatcaaaattcttgcaaggggcttctgc
ttagaaggttttacttttctgcgagacccatggaactggcttgacttcagtgtcatttta
atggcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcctaaagactattgtaggagcc
ctaattcagtctgtgaagaagctctcggacgtaatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagacaattctacttttgaaataaacgttatttcctacttcaacagcacaata
aatgaaaatggtacacttattaatatgacagtgagcacatttaactggaaggattacatt
gaggatgaaactcatttttacactttggaaggacaaagagatgccctactttgtggtaat
agctctgatgcagggcagtgtccagagggatatatctgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgacaccttcagttgggcttttttgtcactctttcgtcta
atgactcaggacttctgggaaaacctgtatcagctgacactacgtgctgctgggaaaaca
tacatgatattttttgttctggtgatttttctggggtctttctatctgatcaacttgatc
ctggctgtggttgccatggcctacgaagaacagaatcaagcgaccatggaagaagcagag
cagaaagaagcagaatttcaacagatgttagaacaactgaagaagcaacaagaagaagct
caggcaacagcagcagtagcagcagcatcagttgcatcaagagatttcagtggtgtaggg
ggattaggagaactcttggaaagttcttcagaagcatcaaagttgagctcaaagagtgct
aaggaaagaagaaacagaaggaagaaaagacgacagaaagaaatgtctgaagcagaggac
aaaggagatattgataagttccccaagtccgagtcagaagacagtatcagaaggaagagt
ttccgcttctccacagaaggaaatcaactgacatatgaaaaaaggttcacatctcctcac
cagtctttgctaagcatacgtggttccctgttttctccaaggcgcaacagcaaaacaagc
attttcagtttcagaggtcatgcaaaggatgtaggatcagaaaatgactttgctgatgat
gagcatagcactcttgaagacaatgagagcagaagagattcactctttgttccaaatcga
cacggagaacggcgcaacagcaacattagtcaagccagtgtatcatctagaatggtacca
gctcttccagtaaatggaaagatgcacagcactgtggattgcaatggagtagtttcctta
gttggaggaccttcacctttaacttcacctgctggtcagcttgtaccagagggcaccact
acagaaacagagataagaaaaagacgactgagttcttatcaaatttccatggaaatgcta
gaagattctgctgcaagacaaagagcaatgagtatagccagcatacttacaaatacaatg
gaagagcttgaagaatccagacagaagtgcccaccatgctggtacagatttgcgaacact
ttcttgatctgggattgctggagtccctggttaaaagtaaaacatgttgtcaatttagtt
gtgatggatccatttgttgatcttgctataactatttgcattgttttaaacacattgttt
atggccatggaacatcacccaatgacagaacagtttagcagtgtcctttctgtggggaac
ctggtattcaccgggatattcacagcagaaatggtactaaagataattgccatggaccct
tattattatttccaagaaggctggaatatttttgatggtattattgttagccttagttta
atggagcttggtcttgcaaatgttgaaggattatctgttcttcggtcattcagattgttg
cgagttttcaaattggcaaaatcttggcccactctaaatatgctgattaagattattggc
aactcagtgggtgctctggggaatctgaccctggtgctggccatcattgtgttcattttc
gctgtggttgggatgcagctgtttgggaaaagctacaaggaatgtgtctgcaagatctcc
agtgactgtgaacttccacgctggcacatgcatgattttttccactctttcctgattgta
ttccgtgtgctgtgtggagaatggatagaaacaatgtgggactgcatggaagttgcaggc
caaaccatgtgccttattgttttcatgctggtcatggtgattggaaaccttgtggtattg
aacctatttctggccttgctgctgagctcatttagttcagacaaccttgctgctaccgat
gatgataatgaaatgaacaatctccagattgctgtggcaaggattcagaagggaatagat
tatgttaaaaaaaagatacaggaattcatccaaaaagccttcattagaaagcagaaagct
ttagaggaaatcaaagcacttgaagagttaaacaacaagaaaggcagctgcatttccaat
catactgctgttgaaataagcaaagatatgaattatcttaaagatgggaatggaaccacc
agtggtgtaggaacaggcagcagtgtggaaaaatgcgtaattgatgaaaacgattacatg
tcattcataaacaacccaggtctcactgtgacagtgcccattgcagttggagaatcagat
tttgaaaatttaaatacagaagaatttagcagtgaatctgatatggaagaaagcaaacag
aaactaaatgcatccagttcatcagaaggcagcacagttgatattgctcctcctggagag
ggcgagcaagcagaaattgaaagtgaagaagctcttgaaccagaagcctgttttacagaa
ggttgcgtaaagaaatttccatgttgtcaagtaagtatagaggatggcaaaggaaaaatt
tggtggaatctcagaaaaacttgctacagcatcgttgagcacaactggtttgagactttc
attgtcttcatgattctcctcagcagtggagcactagcttttgaagatatatatattgaa
cagcgcaaaactatcaagacaatgctggaatatgctgacaaagtttttacgtatattttc
attttggaaatgcttttaaaatgggtagcatatggttttcaaatatattttactaatgcc
tggtgctggctggacttcctgattgttgatgtctcattggttagtttaatagccaatgct
ttgggctattctgaacttggtgccattaaatcgcttcggacattacgagctttaagacct
ttaagagccttgtcacgatttgaaggaatgagggtggttgtaaatgcccttgtaggagca
attccatctatcatgaatgtattgctggtttgtcttatattctggctcatcttcagcatc
atgggagtgaatctgtttgctggcaaattctatcactgtgtcaacaccacaactggtgag
atgtttgatgtcagtgatgtcaacaattatactcagtgtgaggaactcataaaaaacaat
caaagtgcccgatggaaaaatgtgaaagttaactttgataatgtaggagctggatacctt
gctcttcttcaagtagctactttcaaaggatggatggatattatgtatgctgctgttgat
tcacgagatgtaaaagatcaacctaagtatgaggacaacttgtatatgtatctttatttt
gtcatctttatcatatttggatcattctttaccttgaaccttttcattggtgtcattata
gacaacttcaaccaacaaaaaaagaagtttggaggtcaggatatatttatgacagaagaa
cagaagaaatactacaatgcgatgaagaaactgggatccaaaaagccacagaaacctata
ccaaggccagtgaacaaattccaaggcatggtctttgattttgtaaccaaacaagtattt
gacatcagcatcatgatactcatctgccttaacatggtcacaatgatggtagaaacagac
gaccagagtaaagaaatggaaacaattttatcccggattaaccttgtgttcattatcctt
ttcactggagaatgtgtcctgaaattgatttcacttcgccattactacttcactctaggc
tggaatatttttgattttgtggttgtgattctctccatagtaggtatgttcttagctgag
atgattgagaaatattttgtgtccccaacgctattcagagtcatccgacttgccagaatt
ggccgaatcctgcgtctcattaaaggcgctaagggaatccgcactctgctttttgctttg
atgatgtctcttcctgctttgttcaacattggtctgctgctgttcctggtcatgtttatc
tatgcgatatttggcatgtccaactttgcctatgttaagagggaagttgggattgatgat
atgttcaactttgaaacgtttggcaacagcatgatctgcctttttcaaattactacatct
gcaggctgggatggtttgctagctccaattcttaacagtggggaaccagactgtgatccc
cataaagaccatccagggagctccgttaaaggtgactgtggcaacccttctgttgggatt
ttcttctttgtcagctacattatcatatcatttctggtagtggtgaacatgtacattgct
gtgattttggagaacttcagtgttgctactgaagaaagcgctgaacccttgagtgaggat
gactttgagatgttctatgaagtctgggagaagtttgatcccgatgccacacaattcata
gaatacagtaagctgtcagattttgcagcttcgttagatcctcctcttctcatagcaaaa
ccaaacaaagtccagcttattgcaatggatctgcccatggtaagcggcgacagaattcac
tgccttgacatcttatttgctttcacaaagcgtgttttgggggaaagtggggagatggac
gccctcagaatacagatggaagatcggtttatggcagccaatccttctaaagtctcatat
gaaccaattacaaccacattaaaacgaaaacaggaggaggtatctgctgtcattattcag
cgtgcttacaggcattaccttttaaggcaaaaagttaaacaggtgtctagtatatataac
agaaacaaaaacaaagaaggagatggaccagttataaaagagataattattgataaacta
aatgggaactccactccagaaaagacagatgagagttcctctacaacttccccaccttct
tatgacagtgtaacaaagccagagaaagaaaaatatgaaaaagataaagcagaaaagaac
tacaaaggtaaagatgtcagggaacataaaaaataa
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