KEGG   Strigops habroptila (Kakapo): 115615047
Entry
115615047         CDS       T08851                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab04510  Focal adhesion
shab04512  ECM-receptor interaction
shab04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:shab00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115615047 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115615047 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115615047 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:shab00535]
    115615047 (COL9A3)
Proteoglycans [BR:shab00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   115615047 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 115615047
NCBI-ProteinID: XP_030358544
LinkDB
Position
13:13506071..13541455
AA seq 675 aa
MAGFSALGLLFLCQLLATTSAQRVGPQGPPGPRGPPGPSGKDGIDGEPGPPGLPGPPGPK
GAPGKPGAAGEAGLPGLPGVDGLTGNDGPPGPNGPPGDRGALGPAGPPGPAGKGLPGPPG
PPGPSGLPGGNGFRGPPGPFGLPGFPGPPGPPGPPGLPGAIPDGGGDLQCPALCPPGPPG
PPGMPGFKGHTGHKGEPGEVGKEGEKGNPGPPGPPGIPGSVGLQGPRGLRGLPGPIGPAG
DRGDIGFRGPPGIPGPPGKAGEQGNKGPQGFRGPKGDTGRPGPKGNPGARGLIGEPGMPG
KDGRDGAPGLDGEKGDAAPMGAPGEKGPNGLPGLPGRAGLKGSKGEPGSPGEMGEAGPSG
EPGIPGDVGIPGERGLPGPRGATGPLGLQGPVGAPGVRGFQGPKGASGEPGLPGPTGIRG
ELGDRGPTGVPGPKGNQGIAGADGLPGDKGELGPFGPPGQKGEPGKRGELGPKGAQGPNG
TAGVPGIPGHPGPMGRQGEQGVPGITGKPGPPGKEASEQHIRELCGEMISDQIAQLAANL
RKPLSPGMTGRPGPAGPPGPPGAVGSVGHPGPRGPPGYRGPTGELGDPGPRGDTGEKGDK
GPVGQGIDGPDGDQGLQGPPGVPGVTKNGRDGAQGEPGLPGDPGTPGAIGAQGTPGICDT
SACMGAVGVSTSKKS
NT seq 2028 nt   +upstreamnt  +downstreamnt
atggctggattctctgctcttgggcttctcttcctctgtcaactattagccacaacatca
gctcagagagtaggaccacaaggccctcctggaccacgaggaccccctggaccatctggg
aaggacggcatagatggagagccgggccctcctggtttgccaggcccaccagggccaaaa
ggtgcaccagggaagcctggagcagctggtgaagccggattgcctggccttcctggagtg
gatggtttaacaggaaatgatggcccacctggcccaaatgggcctccaggagaccgtggt
gcattgggacctgctgggccacctggacctgctggaaaaggactaccaggacctccaggg
cctccaggacccagtgggctcccaggtggaaatggatttcggggtcctcctggacctttt
ggtctgccgggattcccagggcctcctggaccacccggacctcctggtcttccaggcgca
attcctgatggcggtggggaccttcagtgcccagctctgtgcccaccaggtcctccaggt
cccccaggaatgccagggttcaagggacacactggtcacaaaggagaacctggtgaagta
ggaaaagaaggagagaagggtaaccctggccctccaggtcctccaggcatccccggcagc
gttggcctgcagggcccaagaggactaagaggacttcctggtccaataggtccagctggt
gacagaggtgacattggtttccgagggccgcctggaatcccaggacctccagggaaagct
ggagagcaaggaaacaaaggacctcaaggattcagagggcccaaaggagatactggtaga
cctggaccgaaaggaaacccaggggctcgtggactcataggagaacctggcatgcctggc
aaggatggacgggatggggctcctggactcgatggtgagaagggtgatgcagctcccatg
ggtgctcctggagagaaggggccaaatggacttcctggactgcctggaagagcaggtctt
aaaggctcaaagggtgaaccaggcagtcctggagagatgggagaggcaggtccctctgga
gagccaggcatccctggcgatgttggtattcctggtgagagaggtctgccgggcccccga
ggagcaactggaccacttggtctgcagggcccagtgggagcccccggtgtcagaggtttc
cagggtcccaaaggtgccagcggtgaacctggcctgcctggtccaactggaattcgtgga
gagttaggtgacaggggtcctactggtgttcctggtcccaaaggtaaccagggcattgct
ggagcagatggtctcccaggggacaaaggagaactgggtccctttggtccccctggccaa
aaaggagagccaggaaaaagaggagaacttggtccaaaaggtgcccaagggcctaatggg
acagctggagtaccgggaatcccaggacatccagggcccatgggccgtcagggagagcaa
ggcgttcccggcatcacaggaaaacctgggcctcctggcaaagaggccagtgaacaacat
ataagagaactctgtggggaaatgataagtgatcaaattgcacagttagctgctaacctg
aggaagcccttgtctcctggaatgacgggtcggcccggccccgctggtcccccaggtcca
cctggagctgtgggaagtgttgggcatcctggtcctcgtggtcccccgggatacagaggg
ccaacaggagagctgggtgatcctggtcccagaggtgacactggcgagaagggagacaag
ggacctgttggtcaaggtattgatgggcctgatggtgatcaaggacttcaaggaccacct
ggtgtacctggagtcactaaaaatggtcgtgatggtgctcagggtgaacccggtcttcca
ggggatcctggtactcctggtgctattggggctcagggaactccaggaatatgtgacacg
tcggcttgcatgggagctgtcggagtatcaacttccaaaaaatcataa

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