Strigops habroptila (Kakapo): 115616117
Help
Entry
115616117 CDS
T08851
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04510
Focal adhesion
shab04512
ECM-receptor interaction
shab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115616117 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115616117 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115616117 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
shab00535
]
115616117 (COL9A2)
Proteoglycans [BR:
shab00535
]
Extracellular matrix (ECM) proteoglycans
Others
115616117 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
115616117
NCBI-ProteinID:
XP_030360846
LinkDB
All DBs
Position
12:complement(6811207..6824674)
Genome browser
AA seq
690 aa
AA seq
DB search
MAGGAPLLQLWLLLQAACLCLAQIRGPPGEPGPRGPPGPPGVPGADGVDGDKGSAGAPGS
PGVKGEPGAPGPDGPPGKPGIDGLTGAKGEPGPIGGPGVKGQPGLPGPPGLPGPSLPGPP
GLPGQVGLPGEIGALGPKGDPGPDGPRGPPGPPGKPGPPGHIQGVEGSADFLCPTSCPPG
PKGPQGLQGLKGHRGRPGALGEPGRQGGQGPKGDVGVSGEQGIPGPPGPQGLRGYPGMAG
PKGETGPAGYKGMVGTIGAAGRPGREGPKGPPGDPGEKGELGGRGIRGPQGDIGPKGENG
LPGIDGKDGTPGIPGVKGSAGQAGRPGIPGHRGQAGLPGQPGSKGGPGDKGEVGARGQPG
VTGAPGQIGEPGPRGEQGPPGVPGVKGDRGERGPVGPAGEQGKAGSKGEQGPPGIPGPQG
LLGVKGDKGSPGKIGPKGSTGDPGVHGLAGLKGEKGESGEPGPKGQQGIQGELGFPGPSG
DAGAPGTQGYPGPPGPRGLVGERGVPGMPGQRGVAGRDAGDQHIVDVVLKMLQEQLAEVA
VSAKRAALGGVGAMGPPGPPGPPGPPGEQGPHGPMGPRGVPGILGAVGQIGNIGPKGKRG
EKGERGEAGRGHPGMPGPPGIPGLPGTPGHAVDGRPGERGAPGSPGLAGRPGLPGPTGLP
GFCEPAACLGASAYAAARMAEPGAVKGPVY
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggcgcccccctgctccagctctggctcctgctccaagccgcctgcctctgc
ctggcgcagatccgagggccgccgggagagcccggcccgcgagggccccccggtccccca
ggagtgccgggagcggatggcgttgatggtgacaaaggctctgccggagccccggggtcc
ccgggtgtcaagggggagcctggagcccctggtccagatgggcccccagggaagccgggc
atcgatggcctgacgggagccaaaggggagccaggacccatcggcgggccaggagttaaa
ggccagcctggacttccagggccaccagggctccccggtccttcactgccaggaccaccc
gggcttccaggccaggttgggctgcccggagagatcggagcactgggacccaagggtgac
cccggacccgacggcccgcgggggcccccaggccctccagggaaacccggccccccagga
cacatccaaggagtggaaggcagcgctgatttcttgtgcccaaccagctgcccaccaggt
cctaaaggcccccagggactgcagggactgaagggacacagaggccgccctggtgccctt
ggggagcctggcaggcagggcgggcagggccccaagggcgacgttggtgtctctggagaa
caaggcatcccaggccccccgggacctcagggcttgaggggttaccccggcatggcagga
cccaagggcgagacgggtcctgctggatacaaggggatggttgggaccatcggcgcggct
gggcggccgggcagggaaggccccaagggaccacctggggaccctggtgagaagggagag
ctgggtggccgtggcatcaggggcccccaaggagacattggccccaagggggagaacggt
ctcccaggtatcgatggcaaagacgggaccccgggtatcccaggagtgaagggcagcgca
ggacaggctggacgcccaggaataccgggacaccggggacaagctggcttgccgggccag
ccaggaagcaaaggtggcccaggagacaagggtgaagtgggtgctcggggccagcccggt
gtcaccggtgccccagggcagatcggtgagcctggacctcgcggcgagcagggaccaccg
ggtgtgcccggggtgaagggtgaccggggagaacgtggccccgtgggtcccgccggtgag
caggggaaagcggggtcaaagggcgagcagggtccaccagggatcccagggccccaaggc
ttgctgggagtcaaaggagacaagggctccccagggaaaatcggccccaaaggcagcact
ggagatcctggtgttcatggacttgcagggctgaagggagagaagggtgaatcaggagag
ccaggaccaaagggacagcaaggcatccagggcgagctgggcttccccggcccctcgggg
gatgcgggtgctcccggcacccagggctacccgggaccccccgggccgcgaggactcgtc
ggagagcgtggtgtgccggggatgcccggccagcgcggagtggcgggccgggatgctggg
gaccagcacatcgtcgatgtggtcctgaagatgctgcaagagcagctggcggaggtggct
gtcagcgctaagagagctgccctgggaggagtgggtgccatgggaccccccgggcctcct
ggtcctccagggccacccggtgagcagggtccacatggacccatgggacctcgaggtgta
cctggcatcctgggtgctgttgggcagatcggcaacataggacctaaagggaagcgaggt
gagaagggggagcgaggagaagctggccgcggccacccaggcatgccgggccccccgggc
atcccaggtctccccggcaccccgggccatgctgtggatggcaggccgggcgagcggggc
gcgccgggctccccgggcctcgcgggccggccgggcctgcccggccccaccgggctgccg
gggttctgcgagccggccgcctgcctcggggcctcagcctacgccgcggcgcgcatggcg
gagccgggcgccgtcaagggacccgtgtactga
DBGET
integrated database retrieval system
